Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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genomics-workspace.cwl
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Path: flow_genomicsWorkspace/genomics-workspace.cwl Branch/Commit ID: 68c9a1724f9fdb8e5e38a34c54414699a1e18407 |
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genomics-workspace.cwl
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Path: flow_genomicsWorkspace/genomics-workspace.cwl Branch/Commit ID: 91e974386947bb16e5123c71a1fb6d9e4c9d4d9a |
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genomics-workspace-genome.cwl
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Path: flow_genomicsWorkspace/genomics-workspace-genome.cwl Branch/Commit ID: 096a9feffe292a1aeb329552661d27bb579e084c |
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WGS QC workflow
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Path: definitions/subworkflows/qc_wgs.cwl Branch/Commit ID: adcae308fdccaa1190083616118dfadb4df65dca |
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bams2gvcf.wBQSR.cwl
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Path: Workflows/bams2gvcf.wBQSR.cwl Branch/Commit ID: 90742a252865d50bec7b0b167ccecf6f1424ea28 |
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workflow.cwl
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Path: workflow/cwl/workflow.cwl Branch/Commit ID: 0840a0024122dbfe88e52e2a09ff05b298218efe |
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schemadef-wf.cwl
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Path: cwltool/schemas/v1.0/v1.0/schemadef-wf.cwl Branch/Commit ID: ead263db0e167db39ddbdc79b04d343943d129b6 |
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HS Metrics workflow
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Path: definitions/subworkflows/hs_metrics.cwl Branch/Commit ID: 844c10a4466ab39c02e5bfa7a210c195b8efa77a |
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Build Bowtie indices
Workflow runs [Bowtie](http://bowtie-bio.sourceforge.net/tutorial.shtml) v1.2.0 (12/30/2016) to build indices for reference genome provided in a single FASTA file as fasta_file input. Generated indices are saved in a folder with the name that corresponds to the input genome |
Path: workflows/bowtie-index.cwl Branch/Commit ID: c8c5342907761c21f115a026b729ef57830f42a5 |
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bgzip and index VCF
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Path: definitions/subworkflows/bgzip_and_index.cwl Branch/Commit ID: 9e5f228bc1a3d0dfe950b5d41d7e4319e834a6d4 |
