Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	gathered exome alignment and somatic variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/gathered_somatic_exome.cwl Branch/Commit ID: a93be3183c2218ee50f13ae2675dd1cde563fdbc
	spurious_annot pass2	https://github.com/ncbi/pgap.git Path: spurious_annot/wf_spurious_annot_pass2.cwl Branch/Commit ID: 8e00678051e8e11fe2798175401bce04c7eeef19
	xenbase-fastq-bowtie-bigwig-se-pe.cwl	https://github.com/datirium/workflows.git Path: subworkflows/xenbase-fastq-bowtie-bigwig-se-pe.cwl Branch/Commit ID: e9a24699d8b5ffe64412b1ba0af8448c281b223a
	integrity.cwl	https://github.com/NCI-GDC/gdc-dnaseq-cwl.git Path: workflows/dnaseq/integrity.cwl Branch/Commit ID: 17823fcd036d134df803fbf76e23b0bc5eabedfd
	bwa_se.cwl	https://github.com/NCI-GDC/gdc-dnaseq-cwl.git Path: workflows/bamfastq_align/bwa_se.cwl Branch/Commit ID: 18affdd927cc388fab2c113dc2ec6df782af2a52
	mutect parallel workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/mutect.cwl Branch/Commit ID: 869b331cfeb9dbd5907498e3eccdebc7c28283e5
	scatterfail.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/scatterfail.cwl Branch/Commit ID: e59538cd9899a88d7e31e0f259bc56734f604383
	umi duplex alignment workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/duplex_alignment.cwl Branch/Commit ID: a23f42ef49c10a588fd35a3afaad5de03e253533
	xenbase-sra-to-fastq-se.cwl	https://github.com/datirium/workflows.git Path: subworkflows/xenbase-sra-to-fastq-se.cwl Branch/Commit ID: e9a24699d8b5ffe64412b1ba0af8448c281b223a
	Bacterial Annotation, pass 3, structural annotation, functional annotation: ab initio GeneMark, by WP, by HMM (second pass)	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_bacterial_annot_pass3.cwl Branch/Commit ID: 7e3e1cb249e85285e27ef3ebd4104965f835241d