Explore Workflows
View already parsed workflows here or click here to add your own
Graph | Name | Retrieved From | View |
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Bisulfite QC tools
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![]() Path: definitions/subworkflows/bisulfite_qc.cwl Branch/Commit ID: 6f9f8a2057c6a9f221a44559f671e87a75c70075 |
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bam to trimmed fastqs and HISAT alignments
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![]() Path: definitions/subworkflows/bam_to_trimmed_fastq_and_hisat_alignments.cwl Branch/Commit ID: ddd748516b25256a461ea9277303406fa2759b00 |
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umi per-lane alignment subworkflow
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![]() Path: definitions/subworkflows/umi_alignment.cwl Branch/Commit ID: 869b331cfeb9dbd5907498e3eccdebc7c28283e5 |
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bam_readcount workflow
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![]() Path: definitions/subworkflows/bam_readcount.cwl Branch/Commit ID: a93be3183c2218ee50f13ae2675dd1cde563fdbc |
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varscan somatic workflow
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![]() Path: definitions/subworkflows/varscan.cwl Branch/Commit ID: 0b0ad1a54f0f6849dc645449b079470448a23095 |
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bgzip and index VCF
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![]() Path: definitions/subworkflows/bgzip_and_index.cwl Branch/Commit ID: 0b0ad1a54f0f6849dc645449b079470448a23095 |
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transform.cwl
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![]() Path: workflows/dnaseq/validate/transform.cwl Branch/Commit ID: 17823fcd036d134df803fbf76e23b0bc5eabedfd |
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Varscan Workflow
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![]() Path: definitions/subworkflows/varscan_pre_and_post_processing.cwl Branch/Commit ID: e2a34d2b8c406db9aed8e49e8bdcf36f51444379 |
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count-lines1-wf.cwl
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![]() Path: cwltool/schemas/v1.0/v1.0/count-lines1-wf.cwl Branch/Commit ID: 9e7c68c0834645ba53a7e2b5f70d53df9d051c92 |
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Unaligned to aligned BAM
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![]() Path: definitions/subworkflows/align.cwl Branch/Commit ID: a9133c999502acf94b433af8d39897e6c2cdf65f |