Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph grep-and-count.cwl

https://github.com/markrobbo/workflows.git

Path: workflows/presentation-demo/grep-and-count.cwl

Branch/Commit ID: master
workflow graph genomics-workspace-cds.cwl

https://github.com/nal-i5k/organism_onboarding.git

Path: flow_genomicsWorkspace/genomics-workspace-cds.cwl

Branch/Commit ID: master
workflow graph preprocessing for metagenomic short reads

https://github.com/EBI-Metagenomics/CWL-assembly.git

Path: src/workflows/metagenome_qc.cwl

Branch/Commit ID: master
workflow graph bam to trimmed fastqs and biscuit alignments

https://github.com/tmooney/cancer-genomics-workflow.git

Path: definitions/subworkflows/bam_to_trimmed_fastq_and_biscuit_alignments.cwl

Branch/Commit ID: downsample_and_recall
workflow graph revsort.cwl

Reverse the lines in a document, then sort those lines.

 https://github.com/theferrit32/toil.git

Path: src/toil/test/cwl/revsort.cwl

Branch/Commit ID: master
workflow graph SSU-from-tablehits.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/SSU-from-tablehits.cwl

Branch/Commit ID: 0fed1c9
workflow graph myAIWorkflow2.cwl

This CWL workflow outlines the steps for setting up and executing an experiment based on objectives, SOP references, parameters, and experimental design.

https://github.com/pascmont/cwltest.git

Path: myAIWorkflow2.cwl

Branch/Commit ID: main
workflow graph Subworkflow that runs cnvkit in single sample mode and returns a vcf file

https://github.com/fgomez02/analysis-workflows.git

Path: definitions/subworkflows/cnvkit_single_sample.cwl

Branch/Commit ID: No_filters_detect_variants
workflow graph pz_workflow.cwl

https://github.com/EiffL/descpipe-cwl.git

Path: workflows/pz_workflow.cwl

Branch/Commit ID: master
workflow graph exomeseq-gatk4-01-preprocessing.cwl

https://github.com/duke-gcb/bespin-cwl.git

Path: subworkflows/exomeseq-gatk4-01-preprocessing.cwl

Branch/Commit ID: master