Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph htseq_workflow.cwl

https://github.com/NCI-GDC/htseq-cwl.git

Path: workflows/subworkflows/htseq_workflow.cwl

Branch/Commit ID: master
workflow graph Uses Bruker TopSpin to convert a zipped NMR data directory to JCAMP-DX

https://github.com/NFDI4Chem/formaTAPIRest.git

Path: cwl/zipped2bruker2jcamp.cwl

Branch/Commit ID: main
workflow graph 01-qc-se.cwl

ATAC-seq 01 QC - reads: SE

 https://github.com/Duke-GCB/GGR-cwl.git

Path: v1.0/ATAC-seq_pipeline/01-qc-se.cwl

Branch/Commit ID: master
workflow graph workflow.cwl

https://github.com/Andreja28/cloud-workflows.git

Path: cwl/bone-min-org-app/workflow.cwl

Branch/Commit ID: master
workflow graph test_steps2.cwl

https://github.com/MGuevaraO/cwl_test.git

Path: test_steps2.cwl

Branch/Commit ID: main
workflow graph count-lines9-wf-noET.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/count-lines9-wf-noET.cwl

Branch/Commit ID: main
workflow graph Immunotherapy Workflow

https://github.com/tmooney/cancer-genomics-workflow.git

Path: definitions/pipelines/immuno.cwl

Branch/Commit ID: downsample_and_recall
workflow graph oxog_sub_wf.cwl

This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow!

https://github.com/svonworl/OxoG-Dockstore-Tools.git

Path: oxog_sub_wf.cwl

Branch/Commit ID: develop
workflow graph 01-qc-pe.cwl

STARR-seq 01 QC - reads: PE

 https://github.com/Duke-GCB/GGR-cwl.git

Path: v1.0/STARR-seq_pipeline/01-qc-pe.cwl

Branch/Commit ID: master
workflow graph step3: create STAR index

create STAR index for mapping CAGE-Seq data (step 1: decompress reference genome fasta file, step 2: create STAR index)

 https://github.com/RyoNozu/CWL4IncorporateTSSintoGXF.git

Path: workflow/02_star_index_subworkflow.cwl

Branch/Commit ID: main