Explore Workflows

PGAP pipeline for external usage, powered via containers, simple user input: (FASTA + yaml only, no template)

https://github.com/ncbi/pgap.git

Path: pgap.cwl

Branch/Commit ID: 0d0ba0c3410e8aee55c82f077cee31d8ee929b5a

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/steplevel-resreq.cwl

Branch/Commit ID: 875b928ce50a3202f5954843b79ea86683c160fa

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/gathered_somatic_exome.cwl

Branch/Commit ID: f45b52a24c7b54a75368dcbab24b4eb2c5a9c75a

https://github.com/NAL-i5K/CWL_Common-Workflow-Language.git

Path: demo_workflow5/1st-workflow.cwl

Branch/Commit ID: 82119ce0b24f830a5113661664ef4fef484d4a75

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/steplevel-resreq.cwl

Branch/Commit ID: 216fbe57afcf67d81c99b49c1aa3aee0844f0a6a

https://github.com/nci-gdc/gdc-dnaseq-cwl.git

Path: workflows/fastqtosam/fastqtosam_se.cwl

Branch/Commit ID: a3eec6c1081d28efe00a0d269fb41303acc4ccdd

https://github.com/common-workflow-language/cwltool.git

Path: tests/checker_wf/functional-wf.cwl

Branch/Commit ID: 875b928ce50a3202f5954843b79ea86683c160fa

https://github.com/cancerit/workflow-seq-import.git

Path: cwls/chksum_for_a_currupted_file.cwl

Branch/Commit ID: f63e0781e85d2efc0ae8900548e858813da0b53b

https://github.com/uc-cdis/genomel_pipelines.git

Path: support/gen3_test.pack.cwl

Branch/Commit ID: 8e00b00fe894512d21db96fc33f821310d72506b

Packed ID: subworkflow_test.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/fastqtosam/fastqtosam_pe.cwl

Branch/Commit ID: a3eec6c1081d28efe00a0d269fb41303acc4ccdd