Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	wgs alignment and germline variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/germline_wgs.cwl Branch/Commit ID: 3bb0693076adc1543079a6b136c74906ad546ac6
	collate_unique_rRNA_headers.cwl	https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git Path: tools/collate_unique_rRNA_headers.cwl Branch/Commit ID: 0fed1c959ab33112eae46fb02fceffa8bb26b811
	Run pindel on provided region	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pindel_region.cwl Branch/Commit ID: cfdcd0735e8fb1ac0b97f1a5cbe0cc7e00033dd0
	wf_rnaediting2strands.cwl	https://github.com/YeoLab/sailor.git Path: cwl/wf_rnaediting2strands.cwl Branch/Commit ID: 5eb7864dd3622552dc95a927d3eb6ccf5f107745
	Whole genome alignment and somatic variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/somatic_wgs.cwl Branch/Commit ID: 9e5f228bc1a3d0dfe950b5d41d7e4319e834a6d4
	Vcf concordance evaluation workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/vcf_eval_concordance.cwl Branch/Commit ID: 2ae0a374fab650757cdae4391c8cbd32f02edf97
	step-valuefrom3-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/step-valuefrom3-wf.cwl Branch/Commit ID: 2a8af96d334e6979cb00af4569581d192d43ce41
	HS Metrics workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/hs_metrics.cwl Branch/Commit ID: cfdcd0735e8fb1ac0b97f1a5cbe0cc7e00033dd0
	Detect Variants workflow	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/detect_variants.cwl Branch/Commit ID: 3042812447d9e8889c6118986490e9c9b9b13223
	extract_gencoll_ids	https://github.com/ncbi/pgap.git Path: task_types/tt_extract_gencoll_ids.cwl Branch/Commit ID: 47ccbd0bc7b45bf8b3c92d0a66c1a9a232367a5d