Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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umi per-lane alignment subworkflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/umi_alignment.cwl Branch/Commit ID: f42c889734c8f709ad2fd9090493bcaac8326c98 |
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bam to trimmed fastqs and biscuit alignments
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_to_trimmed_fastq_and_biscuit_alignments.cwl Branch/Commit ID: 479c9b3e3fa32ec9c7cd4073cfbccc675fd254d9 |
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revcomp_with_rename.cwl
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https://github.com/alexbarrera/GGR-cwl.git
Path: workflows/workflows/sanbi_cwltutorial/revcomp/revcomp_with_rename.cwl Branch/Commit ID: 13826f526a99e151e9cf5f22e70bdcf4feea73f4 |
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umi per-lane alignment subworkflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/umi_alignment.cwl Branch/Commit ID: 3b6d0475c80f5e452793a46a38ee188742b86595 |
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gp_makeblastdb
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https://github.com/ncbi/pgap.git
Path: progs/gp_makeblastdb.cwl Branch/Commit ID: 5c40c5a0464c84076e0e407a0e05522b43bdc0a6 |
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scatter GATK HaplotypeCaller over intervals
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/gatk_haplotypecaller_iterator.cwl Branch/Commit ID: e56f1024306aeb427d8aae2fff715ed2e8b8f86f |
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Add snv and indel bam-readcount files to a vcf
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/vcf_readcount_annotator.cwl Branch/Commit ID: 8dc462a7d9ba1479f764682af99c69d8574cb3dc |
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echo-wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/override/echo-wf.cwl Branch/Commit ID: cd779a90a4336563dcf13795111f502372c6af83 |
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blastp_wnode_naming
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https://github.com/ncbi/pgap.git
Path: task_types/tt_blastp_wnode_naming.cwl Branch/Commit ID: 5c40c5a0464c84076e0e407a0e05522b43bdc0a6 |
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Bisulfite QC tools
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bisulfite_qc.cwl Branch/Commit ID: 6949082038c1ad36d6e9848b97a2537aef2d3805 |
