Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	umi molecular alignment workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/molecular_qc.cwl Branch/Commit ID: 3bb0693076adc1543079a6b136c74906ad546ac6
	scatter-valuefrom-wf3.cwl#main	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/scatter-valuefrom-wf3.cwl Branch/Commit ID: d7481d03fa4b5b4630392540f598acfb100b421d Packed ID: main
	runner.cwl	https://github.com/NCI-GDC/gdc-dnaseq-cwl.git Path: workflows/dnaseq/runner.cwl Branch/Commit ID: 23819c2a0dcd98b61487cbc82e602dd58cb4d342
	kmer_cache_store	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_cache_store.cwl Branch/Commit ID: f5d70f3ad365a2c017fab1c9654c88bc1caf41aa
	Subworkflow to allow calling different SV callers which require bam files as inputs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/single_sample_sv_callers.cwl Branch/Commit ID: cfdcd0735e8fb1ac0b97f1a5cbe0cc7e00033dd0
	Whole genome alignment and somatic variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/somatic_wgs.cwl Branch/Commit ID: 9161ef43f7bf0e22b365fde9ec92edcb8601798e
	kmer_cache_retrieve	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_cache_retrieve.cwl Branch/Commit ID: f5d70f3ad365a2c017fab1c9654c88bc1caf41aa
	scatter-wf3.cwl#main	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/scatter-wf3.cwl Branch/Commit ID: 691dea280b40ac177b4a38b33375139ca0ce7e81 Packed ID: main
	downsample unaligned BAM and align	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/downsampled_alignment.cwl Branch/Commit ID: 3bb0693076adc1543079a6b136c74906ad546ac6
	align_merge_sas	https://github.com/ncbi/pgap.git Path: task_types/tt_align_merge_sas.cwl Branch/Commit ID: f5d70f3ad365a2c017fab1c9654c88bc1caf41aa