Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph merge and annotate svs with population allele freq and vep

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/merge_svs.cwl

Branch/Commit ID: 7f9dfad8e45ca096ae738cff646195b2b1ba7d7f
workflow graph extract_readgroups_bam_http.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/extract_readgroups_bam_http.cwl

Branch/Commit ID: 17823fcd036d134df803fbf76e23b0bc5eabedfd
workflow graph HS Metrics workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/hs_metrics.cwl

Branch/Commit ID: a9133c999502acf94b433af8d39897e6c2cdf65f
workflow graph lowercase-directory.cwl

https://github.com/KBNLresearch/ochre.git

Path: ochre/cwl/lowercase-directory.cwl

Branch/Commit ID: d187a94a601e806e001d31362ba0c9c2534eb426
workflow graph running cellranger mkfastq and count

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/cellranger_mkfastq_and_count.cwl

Branch/Commit ID: aba52e94b6d7470132d3c092c26d67e29d615300
workflow graph revsort-array.cwl

Reverse the lines in a document, then sort those lines.

 https://github.com/Duke-GCB/calrissian.git

Path: input-data/revsort-array.cwl

Branch/Commit ID: 2ed785497852f144da8236caccfedad556802d98
workflow graph fastqtosam_se.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/fastqtosam/fastqtosam_se.cwl

Branch/Commit ID: 17823fcd036d134df803fbf76e23b0bc5eabedfd
workflow graph single_lane_sample.cwl

https://github.com/cancerit/cgpRna.git

Path: cwls/single_lane_sample.cwl

Branch/Commit ID: 69e15a07471af52832f925ddd33f3088c00640c4
workflow graph post-correct-test-files.cwl

https://github.com/KBNLresearch/ochre.git

Path: ochre/cwl/post-correct-test-files.cwl

Branch/Commit ID: d187a94a601e806e001d31362ba0c9c2534eb426
workflow graph list ZIP content by URL

curl will download a HTTP/HTTPS resource or file from a given URL, following any redirections.

https://github.com/stain/ro-index-paper.git

Path: code/data-gathering/workflows/zip-content-by-url.cwl

Branch/Commit ID: a3ce8d810d16111d695a04316ef55671d2d38ee5