Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	kf-cram2gvcf_calc_contam.cwl	https://github.com/cr-ste-justine/chujs-alignment-workflow.git Path: workflows/kf-cram2gvcf_calc_contam.cwl Branch/Commit ID: c8255e2aab840f671d9f142d74f915c76415ff51
	tt_kmer_top_n.cwl	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_top_n.cwl Branch/Commit ID: be465ad19b07378f3f863f2c4e0019b420c859f2
	Run genomic CMsearch (Rfam rRNA)	https://github.com/ncbi/pgap.git Path: bacterial_ncrna/wf_gcmsearch.cwl Branch/Commit ID: 497175e1851779c57253d71144860747430d52b1
	tt_fscr_calls_pass1	https://github.com/ncbi/pgap.git Path: task_types/tt_fscr_calls_pass1.cwl Branch/Commit ID: f2bd4687f06f85ea848b6f1ce04ec97f48525334
	tt_fscr_calls_pass1	https://github.com/ncbi/pgap.git Path: task_types/tt_fscr_calls_pass1.cwl Branch/Commit ID: b0ee40d34d233f1611c2e2c66b6d22a3b7deec05
	Bacterial Annotation, pass 2, blastp-based functional annotation (first pass)	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_bacterial_annot_pass2.cwl Branch/Commit ID: c28cfb9882dedd3c522160f933cff1050ae24100
	basename-fields-test.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/basename-fields-test.cwl Branch/Commit ID: ead263db0e167db39ddbdc79b04d343943d129b6
	vqsr-flow.cwl run vqsr flow, including vqsr rcal, vqsr apply and plot	https://github.com/Sentieon/Sentieon-cwl.git Path: stage/vqsr-flow.cwl Branch/Commit ID: d20382adfe7285cb517a25d95d2bcb7586546e23
	spurious_annot pass2	https://github.com/ncbi/pgap.git Path: spurious_annot/wf_spurious_annot_pass2.cwl Branch/Commit ID: b0ee40d34d233f1611c2e2c66b6d22a3b7deec05
	processbamfiles.cwl	https://github.com/PMCC-BioinformaticsCore/janis-examplepipelines.git Path: example_cwl/tools/processbamfiles.cwl Branch/Commit ID: ed99d63d6f4741ac6e1fa7752c62693705d99633