Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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icdar2017st-extract-data-all.cwl#main
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https://github.com/KBNLresearch/ochre.git
Path: ochre/cwl/icdar2017st-extract-data-all.cwl Branch/Commit ID: a62bf3b31df83784c017d30a83ed8e01d454bf1c Packed ID: main |
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Add snv and indel bam-readcount files to a vcf
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/vcf_readcount_annotator.cwl Branch/Commit ID: 3b6d0475c80f5e452793a46a38ee188742b86595 |
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wf-variantcall.cwl
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https://github.com/BD2KGenomics/toil-workflows.git
Path: NA12878-platinum-chr20-workflow/wf-variantcall.cwl Branch/Commit ID: 42125c2912a176e61cb7ca53d9b1785f7a3826fa |
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gp_makeblastdb
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https://github.com/ncbi/pgap.git
Path: progs/gp_makeblastdb.cwl Branch/Commit ID: 7b21dc40840852f3942c31b9c472346ea3f9a3ca |
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Align reference proteins plane complete workflow
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https://github.com/ncbi/pgap.git
Path: protein_alignment/wf_protein_alignment.cwl Branch/Commit ID: 7b21dc40840852f3942c31b9c472346ea3f9a3ca |
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Execute CRISPR
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https://github.com/ncbi/pgap.git
Path: bacterial_mobile_elem/wf_bacterial_mobile_elem.cwl Branch/Commit ID: 7b21dc40840852f3942c31b9c472346ea3f9a3ca |
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exome alignment with qc
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/alignment_exome.cwl Branch/Commit ID: 8438316338e66823e1c9aca9f675b2bf33f2aa59 |
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Bacterial Annotation, pass 2, blastp-based functional annotation (first pass)
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https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass2.cwl Branch/Commit ID: 7b21dc40840852f3942c31b9c472346ea3f9a3ca |
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Subworkflow that runs cnvkit in single sample mode and returns a vcf file
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/cnvkit_single_sample.cwl Branch/Commit ID: 8dc462a7d9ba1479f764682af99c69d8574cb3dc |
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Seed Protein Alignments I
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https://github.com/ncbi/pgap.git
Path: protein_alignment/wf_seed_1.cwl Branch/Commit ID: 16d1198871195e2229fd44dd0ad94a4ed6a87caf |
