Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Run genomic CMsearch (5S rRNA)	https://github.com/ncbi/pgap.git Path: bacterial_noncoding/wf_gcmsearch.cwl Branch/Commit ID: 29deae89a9898bb4dcfc27b7391b7d5067e65068
	BLAST against rRNA db	https://github.com/ncbi/pgap.git Path: bacterial_noncoding/wf_blastn.cwl Branch/Commit ID: 83ef15482f405bc3d24f88cbf405ceffea9b3023
	Add snv and indel bam-readcount files to a vcf	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/vcf_readcount_annotator.cwl Branch/Commit ID: 67f56d3b9c70ad56019ed8aa8d50a128e02be43b
	BLAST against rRNA db	https://github.com/ncbi/pgap.git Path: bacterial_noncoding/wf_blastn.cwl Branch/Commit ID: f390475a4e0898d4933f0a28dae278aa35803eb1
	PGAP Pipeline PGAP pipeline for external usage, powered via containers	https://github.com/ncbi/pgap.git Path: wf_common.cwl Branch/Commit ID: 0d0ba0c3410e8aee55c82f077cee31d8ee929b5a
	hisat2-stringtie_wf_pe.cwl	https://github.com/pitagora-network/pitagora-cwl.git Path: workflows/hisat2-stringtie/paired_end/hisat2-stringtie_wf_pe.cwl Branch/Commit ID: 85c5420fad00cc6ecefb08d3be999e82d4a69bae
	Hello World Outputs a message using echo	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/hello-workflow.cwl Branch/Commit ID: 875b928ce50a3202f5954843b79ea86683c160fa
	step-valuefrom2-wf.cwl	https://github.com/common-workflow-language/common-workflow-language.git Path: v1.0/v1.0/step-valuefrom2-wf.cwl Branch/Commit ID: 8c35118bbcd2b125635dcdfb16a09e09bbfd4015
	gen3_test.pack.cwl#main	https://github.com/uc-cdis/genomel_pipelines.git Path: support/gen3_test.pack.cwl Branch/Commit ID: 8e00b00fe894512d21db96fc33f821310d72506b Packed ID: main
	exome alignment with qc	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/exome_alignment.cwl Branch/Commit ID: e649fcb1092905c539be026a3f23c82d5b0871d2