Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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exome alignment and somatic variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/somatic_exome_mouse.cwl Branch/Commit ID: 742dbafb5fb103d8578f48a0576c14dd8dae3b2a |
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exome alignment and somatic variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/somatic_exome_mouse.cwl Branch/Commit ID: 06d2440d115b446c299b4ce96e8812d2f8df86ec |
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exome alignment and tumor-only variant detection
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https://github.com/litd/analysis-workflows.git
Path: definitions/pipelines/tumor_only_exome.cwl Branch/Commit ID: 193b8de694f262ad55c7635a603c20c124748583 |
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exome alignment and germline variant detection, with optitype for HLA typing
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/germline_exome_hla_typing.cwl Branch/Commit ID: 06d2440d115b446c299b4ce96e8812d2f8df86ec |
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exome alignment and germline variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/germline_exome.cwl Branch/Commit ID: e8b7759826df40b8bb821b40b15aea960a4951c4 |
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GATK4_SomaticVariantCaller_4_1_3_0.cwl
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https://github.com/PMCC-BioinformaticsCore/janis-pipelines.git
Path: janis_pipelines/wgs_somatic/cwl/tools/GATK4_SomaticVariantCaller_4_1_3_0.cwl Branch/Commit ID: 1d45492ae0085824a7ac532d0dfa6621c1cbe415 |
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Detect Variants workflow for WGS pipeline
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/detect_variants_wgs.cwl Branch/Commit ID: 06d2440d115b446c299b4ce96e8812d2f8df86ec |
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exome alignment and germline variant detection, with optitype for HLA typing
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/germline_exome_hla_typing.cwl Branch/Commit ID: d3e4bf55753cd92f97537c7d701187ea92d1e5f0 |
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wgs alignment and germline variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/germline_wgs.cwl Branch/Commit ID: d3e4bf55753cd92f97537c7d701187ea92d1e5f0 |
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Tumor-Only Detect Variants workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/tumor_only_detect_variants.cwl Branch/Commit ID: d3e4bf55753cd92f97537c7d701187ea92d1e5f0 |
