Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
|---|---|---|---|
|
|
blastp_wnode_naming
|
https://github.com/ncbi/pgap.git
Path: task_types/tt_blastp_wnode_naming.cwl Branch/Commit ID: 9e43bc5cff985574e1f8135d4c50b5a347517c9e |
|
|
|
protein annotation
Proteins - predict, filter, cluster, identify, annotate |
https://github.com/MG-RAST/pipeline.git
Path: CWL/Workflows/protein-filter-annotation.workflow.cwl Branch/Commit ID: 81feefc84ec0faecf1ade718001d5f07610e616e |
|
|
|
HS Metrics workflow
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/hs_metrics.cwl Branch/Commit ID: e509210450e4c62aecb99a228fc97f0eae2d9580 |
|
|
|
scatter GATK HaplotypeCaller over intervals
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/gatk_haplotypecaller_iterator.cwl Branch/Commit ID: e509210450e4c62aecb99a228fc97f0eae2d9580 |
|
|
|
etl.cwl
|
https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/etl.cwl Branch/Commit ID: 98af742f0b342b731766bc975b95ee7cc1f90fd2 |
|
|
|
fastqtosam_se.cwl
|
https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/fastqtosam/fastqtosam_se.cwl Branch/Commit ID: 3ae43ed82a98144cfd50d3b5d65f47ce63cbec7c |
|
|
|
transform.cwl
|
https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/dnaseq/transform.cwl Branch/Commit ID: 4460f32c53529e8c68d078cbef466df6610a32aa |
|
|
|
Unaligned BAM to BQSR and VCF
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_to_bqsr.cwl Branch/Commit ID: e509210450e4c62aecb99a228fc97f0eae2d9580 |
|
|
|
hisat2-stringtie_wf_pe.cwl
|
https://github.com/pitagora-network/pitagora-cwl.git
Path: workflows/hisat2-stringtie/paired_end/hisat2-stringtie_wf_pe.cwl Branch/Commit ID: e2528f4d7e4ba5664fc171f9a25fc1490ae27c91 |
|
|
|
extract_capture_kit_http.cwl
|
https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/extract_capture_kit_http.cwl Branch/Commit ID: 98af742f0b342b731766bc975b95ee7cc1f90fd2 |
