Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	exome alignment with qc, no bqsr, no verify_bam_id	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/exome_alignment_mouse.cwl Branch/Commit ID: 6f9f8a2057c6a9f221a44559f671e87a75c70075
	scatter-valuefrom-wf5.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/scatter-valuefrom-wf5.cwl Branch/Commit ID: e835bc0487fe42fb330b6222c9be65d18dd81ec9
	Run tRNAScan	https://github.com/ncbi/pgap.git Path: bacterial_trna/wf_trnascan.cwl Branch/Commit ID: 8e00678051e8e11fe2798175401bce04c7eeef19
	Merge, annotate, and generate a TSV for SVs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/merge_svs.cwl Branch/Commit ID: 6f9f8a2057c6a9f221a44559f671e87a75c70075
	mixed_library_metrics.cwl	https://github.com/nci-gdc/gdc-dnaseq-cwl.git Path: workflows/dnaseq/mixed_library_metrics.cwl Branch/Commit ID: 17823fcd036d134df803fbf76e23b0bc5eabedfd
	exome alignment with qc	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/exome_alignment.cwl Branch/Commit ID: 0b0ad1a54f0f6849dc645449b079470448a23095
	search.cwl#main	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/search.cwl Branch/Commit ID: 03af16c9df2ee77485d4ab092cd64ae096d2e71c Packed ID: main
	Bacterial Annotation, pass 4, blastp-based functional annotation (second pass)	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_bacterial_annot_pass4.cwl Branch/Commit ID: b12ec8c8e832151033b9e6c0a76a3c3df18d45da
	BLAST against rRNA db	https://github.com/ncbi/pgap.git Path: bacterial_noncoding/wf_blastn.cwl Branch/Commit ID: ef266744578e2dcbce57c110c6fa3b9eee91e316
	Tumor-Only Detect Variants workflow	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/tumor_only_detect_variants.cwl Branch/Commit ID: 869b331cfeb9dbd5907498e3eccdebc7c28283e5