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Showing results for "rnaseq" (Show all)

Graph	Name	Retrieved From	View
	trim-rnaseq-se.cwl Runs RNA-Seq BioWardrobe basic analysis with single-end data file.	https://github.com/Barski-lab/workflows.git Path: workflows/trim-rnaseq-se.cwl Branch/Commit ID: 12edfc2207507e53c6b5bb21e50decb5535a12f7
	Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/pvacseq.cwl Branch/Commit ID: 4b5970dcf08bac2598e62ffd2673e67a25004c40
	rnaseq-pe-dutp.cwl Runs RNA-Seq BioWardrobe basic analysis with strand specific pair-end data file.	https://github.com/Barski-lab/workflows.git Path: workflows/rnaseq-pe-dutp.cwl Branch/Commit ID: 12edfc2207507e53c6b5bb21e50decb5535a12f7
	rnaseq-alignment-quantification This workflow retrieve SRA fastqc data and execute QC, alignment and quantification from TPMCalculator	https://github.com/ncbi/cwl-ngs-workflows-cbb.git Path: workflows/RNA-Seq/rnaseq-alignment-quantification.cwl Branch/Commit ID: 11f70a71cb68b3960c2d410ba1fdcd3b8a7e1419
	Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pvacseq.cwl Branch/Commit ID: a9133c999502acf94b433af8d39897e6c2cdf65f
	rnaseq-pe-dutp-mitochondrial.cwl RNA-Seq strand specific mitochondrial workflow for pair-end experiment based on BioWardrobe's basic analysis.	https://github.com/datirium/workflows.git Path: workflows/rnaseq-pe-dutp-mitochondrial.cwl Branch/Commit ID: cf107bc24a37883ef01b959fd89c19456aaecc02
	Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pvacseq.cwl Branch/Commit ID: 18600518ce6539a2e29c1707392a4c5da5687fa3
	Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pvacseq.cwl Branch/Commit ID: 2e0562a5c3cd7aac24af4c622a5ae68a7fb23a71
	rnaseq-alignment-quantification This workflow retrieve SRA fastqc data and execute QC, alignment and quantification from TPMCalculator	https://github.com/ncbi/cwl-ngs-workflows-cbb.git Path: workflows/RNA-Seq/rnaseq-alignment-quantification.cwl Branch/Commit ID: e541470bc9d0b064bc4ed7dd2b45d8ec67760613
	trim-rnaseq-se.cwl Runs RNA-Seq BioWardrobe basic analysis with single-end data file.	https://github.com/Barski-lab/workflows.git Path: workflows/trim-rnaseq-se.cwl Branch/Commit ID: 801f7b363e0599b9a28ecda696dfdb1c0e40ce71

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