Explore Workflows

https://github.com/DataBiosphere/topmed-workflows.git

Path: vcf-comparator/ConcordanceTestWorkflow.cwl

Branch/Commit ID: d110f44f8f2244210765c767535c1e235621bb50

XenBase workflow for analysing ChIP-Seq paired-end data

https://github.com/datirium/workflows.git

Path: workflows/xenbase-chipseq-pe.cwl

Branch/Commit ID: 6e09b4bf1ff0eb3dd1294f5578624c5a2a2b0b37

https://github.com/mskcc/roslin-variant.git

Path: setup/cwl/workflows/pair-workflow-sv.cwl

Branch/Commit ID: bf7303dd44d7f0ec3d3cd2e0829e28a78bd941e2

https://github.com/curoverse/l7g.git

Path: cwl-version/tagset/l7g-tagset.cwl

Branch/Commit ID: 7e3bca17f8c4349357c6d01cae54e27047ff9e7d

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/5S-from-tablehits.cwl

Branch/Commit ID: f6b5196bd493b0872ee6e63aa3499738bb7d53d6

https://github.com/alexbarrera/GGR-cwl.git

Path: workflows/workflows/sanbi_cwltutorial/revcomp/revcomp_with_rename.cwl

Branch/Commit ID: 71146d85ae7f0c562ec0d454fbbb7085a827356e

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/count-lines3-wf.cwl

Branch/Commit ID: 1f501e38ff692a408e16b246ac7d64d32f0822c2

This workflow takes in single-end reads, and performs the following steps in order: demux_se.cwl (does not actually demux for single end, but mirrors the paired-end processing protocol)

https://github.com/YeoLab/eclip.git

Path: cwl/wf_demultiplex_se.cwl

Branch/Commit ID: ad2e4a3c8a03a4046ffec31b12054df0ad7e2307

https://github.com/curoverse/l7g.git

Path: cwl-version/convert2fastj/gvcf_version/cwl/tiling_convert2fastj_gvcf.cwl

Branch/Commit ID: e4076d3ef7deda1bcc57bfe5e3d1dc7bf58238ff

https://github.com/ncbi/pgap.git

Path: protein_alignment/wf_seed.cwl

Branch/Commit ID: 8a8fffb78b1e327ba0da51840ac8acc0c218d611