Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph ConcordanceCheckerWorkflow.cwl

https://github.com/DataBiosphere/topmed-workflows.git

Path: vcf-comparator/ConcordanceCheckerWorkflow.cwl

Branch/Commit ID: 1.30.0
workflow graph EMG pipeline v4.0 (paired end version)

https://github.com/proteinswebteam/ebi-metagenomics-cwl.git

Path: workflows/emg-pipeline-v4-paired.cwl

Branch/Commit ID: master
workflow graph wgetkegg_wf.cwl

https://github.com/manabuishii/wgetkegg.git

Path: wgetkegg_wf.cwl

Branch/Commit ID: master
workflow graph orgaquant_wf.cwl

https://github.com/alexandersenf/orgaquant.git

Path: orgaquant_wf.cwl

Branch/Commit ID: 1.1
workflow graph count-lines6-wf.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/count-lines6-wf.cwl

Branch/Commit ID: master
workflow graph exome alignment with qc

https://github.com/fgomez02/analysis-workflows.git

Path: definitions/pipelines/exome_alignment.cwl

Branch/Commit ID: No_filters_detect_variants
workflow graph main-somatic.cwl

https://github.com/FarahZKhan/bcbio_test_cwl.git

Path: somatic/somatic-workflow/main-somatic.cwl

Branch/Commit ID: master
workflow graph wf_get_peaks_scatter_se_nostats.cwl

The \"main\" workflow. Takes fastq files generated using the seCLIP protocol (https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5991800/) and outputs candidate RBP binding regions (peaks). runs: wf_get_peaks_se.cwl through scatter across multiple samples.

https://github.com/YeoLab/eclip.git

Path: cwl/wf_get_peaks_scatter_se_nostats.cwl

Branch/Commit ID: master
workflow graph filtering.cwl

https://github.com/mskcc/Innovation-Pipeline.git

Path: workflows/subworkflows/filtering.cwl

Branch/Commit ID: master
workflow graph wgs alignment and somatic variant detection

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/somatic_wgs_nonhuman.cwl

Branch/Commit ID: master