Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph EMG QC workflow, (paired end version). Benchmarking with MG-RAST expt.

https://github.com/farahzkhan/ebi-metagenomics-cwl.git

Path: workflows/emg-qc-single.cwl

Branch/Commit ID: master
workflow graph map medium and long reads (greater than 100 bp) against reference genome

https://github.com/common-workflow-library/bio-cwl-tools.git

Path: bwa/BWA-Mem2-paired.cwl

Branch/Commit ID: release
workflow graph project-workflow.cwl

https://github.com/mskcc/argos-cwl.git

Path: project-workflow.cwl

Branch/Commit ID: master
workflow graph stage_data_workflow.cwl

https://github.com/NCI-GDC/htseq-cwl.git

Path: workflows/subworkflows/stage_data_workflow.cwl

Branch/Commit ID: master
workflow graph module-5

https://github.com/mskcc/roslin-variant.git

Path: setup/cwl/module-5.cwl

Branch/Commit ID: dev
workflow graph exomeseq-gatk4-00-prepare-reference-data.cwl

https://github.com/bespin-workflows/exomeseq-gatk4.git

Path: subworkflows/exomeseq-gatk4-00-prepare-reference-data.cwl

Branch/Commit ID: develop
workflow graph Subworkflow to allow calling different SV callers which require bam files as inputs

https://github.com/fgomez02/analysis-workflows.git

Path: definitions/subworkflows/single_sample_sv_callers.cwl

Branch/Commit ID: No_filters_detect_variants
workflow graph 02-trim-se.cwl

ChIP-seq 02 trimming - reads: SE

 https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/ChIP-seq_pipeline/02-trim-se.cwl

Branch/Commit ID: master
workflow graph gvcf-distr.cwl

https://github.com/sentieon/sentieon-cwl.git

Path: stage/gvcf-distr.cwl

Branch/Commit ID: master
workflow graph workflow.cwl

https://github.com/reanahub/reana-demo-root6-roofit.git

Path: workflow/cwl/workflow.cwl

Branch/Commit ID: master