Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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EMG pipeline v3.0 (paired end version)
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/emg-pipeline-v3-paired.cwl Branch/Commit ID: master |
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EMG pipeline v4.0 (single end version)
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https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git
Path: workflows/emg-pipeline-v4-single.cwl Branch/Commit ID: master |
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Single-cell Multiome ATAC and RNA-Seq Aggregate
Single-cell Multiome ATAC and RNA-Seq Aggregate Aggregates data from multiple Single-cell Multiome ATAC and RNA-Seq Alignment experiments |
https://github.com/Barski-lab/sc-seq-analysis.git
Path: workflows/sc-multiome-aggregate-wf.cwl Branch/Commit ID: main |
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varscan somatic workflow
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https://github.com/mnneveau/cancer-genomics-workflow.git
Path: varscan/varscan.cwl Branch/Commit ID: master |
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Find reads with predicted coding sequences above 60 AA in length
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https://github.com/proteinswebteam/ebi-metagenomics-cwl.git
Path: workflows/orf_prediction.cwl Branch/Commit ID: d4e5e53 |
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vcf_concat.cwl
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https://github.com/mskcc/ACCESS-Pipeline.git
Path: workflows/subworkflows/vcf_concat.cwl Branch/Commit ID: master |
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hi-c-processing-parta-juicer.cwl
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https://github.com/mr-c/4dn-dcic-pipelines-cwl.git
Path: cwl_awsem_v1/hi-c-processing-parta-juicer.cwl Branch/Commit ID: dev2 |
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tRNA_selection.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/tRNA_selection.cwl Branch/Commit ID: 3168316 |
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annotator_sub_wf.cwl
This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow! |
https://github.com/david4096/oxog-dockstore-tools.git
Path: annotator_sub_wf.cwl Branch/Commit ID: develop |
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LSU-from-tablehits.cwl
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https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git
Path: tools/LSU-from-tablehits.cwl Branch/Commit ID: 43d2fb8 |
