Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	cwlsite.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/site/cwlsite.cwl Branch/Commit ID: ec2cf2da6c31ffedf827a0fb213b5204e172f510
	exome alignment with qc	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/exome_alignment.cwl Branch/Commit ID: e56f1024306aeb427d8aae2fff715ed2e8b8f86f
	mutect parallel workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/mutect.cwl Branch/Commit ID: 735be84cdea041fcc8bd8cbe5728b29ca3586a21
	count-lines9-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/count-lines9-wf.cwl Branch/Commit ID: f997d13af87216e9b5048c732a511053c7ba714c
	env-wf1.cwl	https://github.com/common-workflow-language/common-workflow-language.git Path: v1.0/v1.0/env-wf1.cwl Branch/Commit ID: 9a23706ec061c5d2c02ff60238d218aadf0b5db9
	running cellranger mkfastq and count	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/cellranger_mkfastq_and_count.cwl Branch/Commit ID: 026bba9511561246ad65458f0f55c88cead26fbd
	02-trim-se.cwl ATAC-seq 02 trimming - reads: SE	https://github.com/alexbarrera/GGR-cwl.git Path: v1.0/ATAC-seq_pipeline/02-trim-se.cwl Branch/Commit ID: dd2241dbbbc23abd91b5e6a18c139530e7ef8d2b
	Create Genomic Collection for Bacterial Pipeline, ASN.1 input	https://github.com/ncbi/pgap.git Path: genomic_source/wf_genomic_source_asn.cwl Branch/Commit ID: cabb1a9a95244e93294727be8cf5816c38992cb0
	process VCF workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/strelka_process_vcf.cwl Branch/Commit ID: 40097e1ed094c5b42b68f3db2ff2cbe78c182479
	scatter GATK HaplotypeCaller over intervals	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/gatk_haplotypecaller_iterator.cwl Branch/Commit ID: 6f9f8a2057c6a9f221a44559f671e87a75c70075