Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	annotator_sub_wf.cwl This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow!	https://github.com/baminou/OxoG-Dockstore-Tools.git Path: annotator_sub_wf.cwl Branch/Commit ID: 96324c1392b6b774498e415346956e77e5d8dd86
	1st-workflow.cwl	https://github.com/common-workflow-language/common-workflow-language.git Path: v1.0/examples/1st-workflow.cwl Branch/Commit ID: d038d860876e7196fe928b8940269dfca51fa9aa
	minibam_sub_wf.cwl This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow!	https://github.com/baminou/OxoG-Dockstore-Tools.git Path: minibam_sub_wf.cwl Branch/Commit ID: f736cf8f663fbba8f1b4158431f2b6a6d88491b4
	status_postgres_workflow.cwl	https://github.com/NCI-GDC/gdc-dnaseq-cwl.git Path: workflows/status/status_postgres_workflow.cwl Branch/Commit ID: 53fd4d4c05891c7c8b5cd6a5a8179a08c2e585c9
	functional analysis prediction with InterProScan	https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git Path: workflows/functional_analysis.cwl Branch/Commit ID: 35a98a23d8e108dbd91814c1688d22063f23a8ea
	EMG QC workflow, (paired end version). Benchmarking with MG-RAST expt.	https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git Path: workflows/emg-qc-paired.cwl Branch/Commit ID: 823cdf7a6601a3799f6167f3566ae02590748f6b
	rRNA_selection.cwl	https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git Path: tools/rRNA_selection.cwl Branch/Commit ID: 47d6375df6c6e4486e03d964b3abf1d71943e609
	oxog_varbam_annotate_wf.cwl This workflow will run OxoG, variantbam, and annotate. Run this as `dockstore --script --debug workflow launch --descriptor cwl --local-entry --entry ./oxog_varbam_annotate_wf.cwl --json oxog_varbam_annotat_wf.input.json `	https://github.com/baminou/OxoG-Dockstore-Tools.git Path: oxog_varbam_annotate_wf.cwl Branch/Commit ID: 958b2a392ab2513aa0fbfab558dbf844b549669d
	SSU-from-tablehits.cwl	https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git Path: tools/SSU-from-tablehits.cwl Branch/Commit ID: 7be1be85bd4f8dc72a9f1572a6637bb1f2536bed
	RNASelector as a CWL workflow https://doi.org/10.1007/s12275-011-1213-z	https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git Path: workflows/rna-selector.cwl Branch/Commit ID: fa86fce570ab91c624272c8ffda672069d2f276d