Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph metrics.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/dnaseq/metrics.cwl

Branch/Commit ID: b2f7a697e08220234062a9cf558ba169d255b4a4

workflow graph count-lines5-wf.cwl

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/count-lines5-wf.cwl

Branch/Commit ID: 1f501e38ff692a408e16b246ac7d64d32f0822c2

workflow graph rna annotation

RNAs - predict, cluster, identify, annotate

https://github.com/MG-RAST/pipeline.git

Path: CWL/Workflows/rna-annotation.workflow.cwl

Branch/Commit ID: f906212e2c9a88280ae36545e5422f25752aa8f4

workflow graph bam-bedgraph-bigwig.cwl

Workflow converts input BAM file into bigWig and bedGraph files

https://github.com/Barski-lab/workflows.git

Path: subworkflows/bam-bedgraph-bigwig.cwl

Branch/Commit ID: fb355eda4555a7e7182a91ce045212b0a087d73f

workflow graph umi molecular alignment workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/molecular_alignment.cwl

Branch/Commit ID: c711498c04d6b8ddf92ddceb6219f074765f7993

workflow graph extract_readgroups_bam_http.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/extract_readgroups_bam_http.cwl

Branch/Commit ID: 0d3fdddeae5a398e476d91aa98766965866d8eae

workflow graph scatterfail.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/scatterfail.cwl

Branch/Commit ID: fec7a10466a26e376b14181a88734983cfb1b8cb

workflow graph Filters gVCFs by a specified quality cutoff

https://github.com/curoverse/l7g.git

Path: cwl-version/filter/cwl/tiling_filtergvcf.cwl

Branch/Commit ID: 2d067e70af7c1a49a2a015ddcd0d859b0b885e98

workflow graph PGAP Pipeline

PGAP pipeline for external usage, powered via containers

https://github.com/ncbi/pgap.git

Path: wf_common.cwl

Branch/Commit ID: 1bf7dc7b03ea3c64e54375cc5c3767849a801000

workflow graph readgroup_fastq_se.cwl

https://github.com/nci-gdc/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/readgroup_fastq_se.cwl

Branch/Commit ID: 0d3fdddeae5a398e476d91aa98766965866d8eae