Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph spurious_annot pass2

https://github.com/ncbi-gpipe/pgap.git

Path: spurious_annot/wf_spurious_annot_pass2.cwl

Branch/Commit ID: 97330968839983824a11ac32dff981d8ecb00955
workflow graph kfdrc_alignment_pipeline.cwl

https://github.com/kids-first/kf-alignment-workflow.git

Path: dev/pilot-run/worklflows/kfdrc_alignment_pipeline.cwl

Branch/Commit ID: 2afe4de3fe046623715bde6f58b218ca063f5a0c
workflow graph kfdrc_bwamem_subwf.cwl

https://github.com/kids-first/kf-alignment-workflow.git

Path: dev/ultra-opt/kfdrc_bwamem_subwf.cwl

Branch/Commit ID: 2afe4de3fe046623715bde6f58b218ca063f5a0c
workflow graph wf-alignment.cwl

https://github.com/bcbio/bcbio_validation_workflows.git

Path: giab-joint/giab-joint-workflow/wf-alignment.cwl

Branch/Commit ID: 9606af30d5f047745a1cd7ec1a59d65508ed256e
workflow graph SSU-from-tablehits.cwl

https://github.com/FarahZKhan/ebi-metagenomics-cwl.git

Path: tools/SSU-from-tablehits.cwl

Branch/Commit ID: bcfe5f9affd23d52467f69b4b21d1098f0ca95d7
workflow graph wf-alignment.cwl

https://github.com/bcbio/bcbio_validation_workflows.git

Path: NA12878-chr20/NA12878-platinum-chr20-workflow-arvados/wf-alignment.cwl

Branch/Commit ID: 9606af30d5f047745a1cd7ec1a59d65508ed256e
workflow graph zip_and_index_vcf.cwl

This is a very simple workflow of two steps. It will zip an input VCF file and then index it. The zipped file and the index file will be in the workflow output.

https://github.com/ICGC-TCGA-PanCancer/pcawg-oxog-filter.git

Path: zip_and_index_vcf.cwl

Branch/Commit ID: cf1f7f985c72cdf6ee0db386791c921376265486
workflow graph step-valuefrom-wf.cwl

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/step-valuefrom-wf.cwl

Branch/Commit ID: e0cc5bd1c2fc4625f2cb5a819d3c1939aa8460db
workflow graph gp_makeblastdb

https://github.com/ncbi-gpipe/pgap.git

Path: progs/gp_makeblastdb.cwl

Branch/Commit ID: 0932e4d778ea981cdc19702eab7fc8d572fe8216
workflow graph mixed_library_metrics.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/mirnaseq/mixed_library_metrics.cwl

Branch/Commit ID: b0ff19e4e2944340dca1aceaa20ba10624fa59d0