Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
|---|---|---|---|
|
|
metrics.cwl
|
https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/dnaseq/metrics.cwl Branch/Commit ID: 20a901f44c9fb0e6f4ee3c40ec33fa4b1c8ef005 |
|
|
|
Bacterial Annotation, pass 3, structural annotation, functional annotation: ab initio GeneMark, by WP, by HMM (second pass)
|
https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass3.cwl Branch/Commit ID: 1bf7dc7b03ea3c64e54375cc5c3767849a801000 |
|
|
|
amplicon_metrics.cwl
|
https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/amplicon_metrics.cwl Branch/Commit ID: 2f7c0e92e7b88b57b86602f11c595661c374008a |
|
|
|
gp_makeblastdb
|
https://github.com/ncbi/pgap.git
Path: progs/gp_makeblastdb.cwl Branch/Commit ID: 1bf7dc7b03ea3c64e54375cc5c3767849a801000 |
|
|
|
Run tRNAScan
|
https://github.com/ncbi/pgap.git
Path: bacterial_trna/wf_trnascan.cwl Branch/Commit ID: 1bf7dc7b03ea3c64e54375cc5c3767849a801000 |
|
|
|
Detect Variants workflow
|
https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/detect_variants.cwl Branch/Commit ID: 8cee1920920ed73384fb3ab74272da9c92a20cf2 |
|
|
|
Create Genomic Collection for Bacterial Pipeline, ASN.1 input
|
https://github.com/ncbi/pgap.git
Path: genomic_source/wf_genomic_source_asn.cwl Branch/Commit ID: 1bf7dc7b03ea3c64e54375cc5c3767849a801000 |
|
|
|
Bacterial Annotation, pass 1, genemark training, by HMMs (first pass)
|
https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass1.cwl Branch/Commit ID: 1bf7dc7b03ea3c64e54375cc5c3767849a801000 |
|
|
|
Bacterial Annotation, pass 4, blastp-based functional annotation (second pass)
|
https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass4.cwl Branch/Commit ID: 1bf7dc7b03ea3c64e54375cc5c3767849a801000 |
|
|
|
Non-Coding Bacterial Genes
|
https://github.com/ncbi/pgap.git
Path: bacterial_noncoding/wf_bacterial_noncoding.cwl Branch/Commit ID: 1bf7dc7b03ea3c64e54375cc5c3767849a801000 |
