Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Varscan Workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/varscan_pre_and_post_processing.cwl Branch/Commit ID: 8cee1920920ed73384fb3ab74272da9c92a20cf2
	Apply filters to VCF file	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/filter_vcf.cwl Branch/Commit ID: 8cee1920920ed73384fb3ab74272da9c92a20cf2
	04-peakcall-se.cwl ATAC-seq 04 quantification - SE	https://github.com/alexbarrera/GGR-cwl.git Path: v1.0/ATAC-seq_pipeline/04-peakcall-se.cwl Branch/Commit ID: 3a4314c66c1eb090e656af5a0d388cec87d65318
	03-map-se-blacklist-removal.cwl ATAC-seq 03 mapping - reads: SE - blacklist removal	https://github.com/alexbarrera/GGR-cwl.git Path: v1.0/ATAC-seq_pipeline/03-map-se-blacklist-removal.cwl Branch/Commit ID: 3a4314c66c1eb090e656af5a0d388cec87d65318
	exome alignment with qc	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/exome_alignment.cwl Branch/Commit ID: 479c9b3e3fa32ec9c7cd4073cfbccc675fd254d9
	step-valuefrom-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/step-valuefrom-wf.cwl Branch/Commit ID: 478c2ffc09fb189c4f36ccb82aad945b3db5f9b3
	exome alignment with qc	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/exome_alignment.cwl Branch/Commit ID: 8cee1920920ed73384fb3ab74272da9c92a20cf2
	Run genomic CMsearch (5S rRNA)	https://github.com/ncbi/pgap.git Path: bacterial_noncoding/wf_gcmsearch.cwl Branch/Commit ID: be5ae41801b19ebc69a2889d8fdb39e8e2359611
	extract_readgroup_fastq_pe.cwl	https://github.com/NCI-GDC/gdc-dnaseq-cwl.git Path: workflows/bamfastq_align/extract_readgroup_fastq_pe.cwl Branch/Commit ID: 2f7c0e92e7b88b57b86602f11c595661c374008a
	BLAST against rRNA db	https://github.com/ncbi/pgap.git Path: bacterial_noncoding/wf_blastn.cwl Branch/Commit ID: be5ae41801b19ebc69a2889d8fdb39e8e2359611