Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Filter Protein Alignments I	https://github.com/ncbi/pgap.git Path: protein_alignment/wf_align_filter.cwl Branch/Commit ID: 5c40c5a0464c84076e0e407a0e05522b43bdc0a6
	spurious_annot pass2	https://github.com/ncbi/pgap.git Path: spurious_annot/wf_spurious_annot_pass2.cwl Branch/Commit ID: 3e7a3c1cc1ed5164ae0a51a96f20d7c480d1d70b
	Bacterial Annotation, pass 1, genemark training, by HMMs (first pass)	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_bacterial_annot_pass1.cwl Branch/Commit ID: 3e7a3c1cc1ed5164ae0a51a96f20d7c480d1d70b
	strelka workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/strelka_and_post_processing.cwl Branch/Commit ID: 8dc462a7d9ba1479f764682af99c69d8574cb3dc
	trnascan_wnode and gpx_qdump combined	https://github.com/ncbi/pgap.git Path: bacterial_trna/wf_scan_and_dump.cwl Branch/Commit ID: 16d1198871195e2229fd44dd0ad94a4ed6a87caf
	Bacterial Annotation, pass 1, genemark training, by HMMs (first pass)	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_bacterial_annot_pass1.cwl Branch/Commit ID: 5c40c5a0464c84076e0e407a0e05522b43bdc0a6
	tt_hmmsearch_wnode.cwl	https://github.com/ncbi/pgap.git Path: task_types/tt_hmmsearch_wnode.cwl Branch/Commit ID: 3e7a3c1cc1ed5164ae0a51a96f20d7c480d1d70b
	step-valuefrom-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/step-valuefrom-wf.cwl Branch/Commit ID: cd779a90a4336563dcf13795111f502372c6af83
	Subworkflow to allow calling different SV callers which require bam files as inputs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/single_sample_sv_callers.cwl Branch/Commit ID: 8438316338e66823e1c9aca9f675b2bf33f2aa59
	Run tRNAScan	https://github.com/ncbi/pgap.git Path: bacterial_trna/wf_trnascan.cwl Branch/Commit ID: 16d1198871195e2229fd44dd0ad94a4ed6a87caf