Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
|---|---|---|---|
|
|
bgzip and index VCF
|
https://github.com/genome/cancer-genomics-workflow.git
Path: varscan/bgzip_and_index.cwl Branch/Commit ID: bc4a0f74082ffcf099977a1efac830d7e100bd66 |
|
|
|
Unaligned to aligned BAM
|
https://github.com/genome/cancer-genomics-workflow.git
Path: unaligned_bam_to_bqsr/align.cwl Branch/Commit ID: bc4a0f74082ffcf099977a1efac830d7e100bd66 |
|
|
|
strelka workflow
|
https://github.com/genome/cancer-genomics-workflow.git
Path: strelka/workflow.cwl Branch/Commit ID: bc4a0f74082ffcf099977a1efac830d7e100bd66 |
|
|
|
alignment_workflow.cwl
|
https://github.com/DataBiosphere/topmed-workflows.git
Path: aligner/topmed-cwl/workflow/alignment_workflow.cwl Branch/Commit ID: bc86954a536313bcbf0888bc66077e7aa1bc0617 |
|
|
|
Detect Docm variants
|
https://github.com/genome/cancer-genomics-workflow.git
Path: docm/workflow.cwl Branch/Commit ID: bc4a0f74082ffcf099977a1efac830d7e100bd66 |
|
|
|
pindel parallel workflow
|
https://github.com/genome/cancer-genomics-workflow.git
Path: pindel/workflow.cwl Branch/Commit ID: bc4a0f74082ffcf099977a1efac830d7e100bd66 |
|
|
|
mutect parallel workflow
|
https://github.com/genome/cancer-genomics-workflow.git
Path: mutect/workflow.cwl Branch/Commit ID: bc4a0f74082ffcf099977a1efac830d7e100bd66 |
|
|
|
Varscan Workflow
|
https://github.com/genome/cancer-genomics-workflow.git
Path: varscan/workflow.cwl Branch/Commit ID: bc4a0f74082ffcf099977a1efac830d7e100bd66 |
|
|
|
cram_to_bam workflow
|
https://github.com/genome/cancer-genomics-workflow.git
Path: cram_to_bam/workflow.cwl Branch/Commit ID: bc4a0f74082ffcf099977a1efac830d7e100bd66 |
|
|
|
Unaligned BAM to BQSR and VCF
|
https://github.com/genome/cancer-genomics-workflow.git
Path: unaligned_bam_to_bqsr/workflow.cwl Branch/Commit ID: bc4a0f74082ffcf099977a1efac830d7e100bd66 |
