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Graph	Name	Retrieved From	View
	gp_makeblastdb	https://github.com/ncbi/pgap.git Path: progs/gp_makeblastdb.cwl Branch/Commit ID: be5ae41801b19ebc69a2889d8fdb39e8e2359611
	Execute CRISPR	https://github.com/ncbi/pgap.git Path: bacterial_mobile_elem/wf_bacterial_mobile_elem.cwl Branch/Commit ID: be5ae41801b19ebc69a2889d8fdb39e8e2359611
	Run genomic CMsearch (Rfam rRNA)	https://github.com/ncbi/pgap.git Path: bacterial_ncrna/wf_gcmsearch.cwl Branch/Commit ID: be5ae41801b19ebc69a2889d8fdb39e8e2359611
	02-trim-se.cwl ChIP-seq 02 trimming - reads: SE	https://github.com/alexbarrera/GGR-cwl.git Path: v1.0/ChIP-seq_pipeline/02-trim-se.cwl Branch/Commit ID: 3a4314c66c1eb090e656af5a0d388cec87d65318
	module-1-scatter-chunk	https://github.com/mskcc/roslin-variant.git Path: setup/cwl/module-1.scatter.chunk.cwl Branch/Commit ID: 45f7695e28fa2185944fd220834eeac2e27d53c7
	05-quantification.cwl ChIP-seq - Quantification - samples: treatment	https://github.com/alexbarrera/GGR-cwl.git Path: v1.0/ChIP-seq_pipeline/05-quantification.cwl Branch/Commit ID: 3a4314c66c1eb090e656af5a0d388cec87d65318
	Bacterial Annotation, pass 1, genemark training, by HMMs (first pass)	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_bacterial_annot_pass1.cwl Branch/Commit ID: be5ae41801b19ebc69a2889d8fdb39e8e2359611
	03-map-se.cwl ChIP-seq 03 mapping - reads: SE	https://github.com/alexbarrera/GGR-cwl.git Path: v1.0/ChIP-seq_pipeline/03-map-se.cwl Branch/Commit ID: 3a4314c66c1eb090e656af5a0d388cec87d65318
	Filter Protein Seeds I; Find ProSplign Alignments I	https://github.com/ncbi/pgap.git Path: protein_alignment/wf_compart_filter_prosplign.cwl Branch/Commit ID: 1bf7dc7b03ea3c64e54375cc5c3767849a801000
	Seed Protein Alignments I	https://github.com/ncbi/pgap.git Path: protein_alignment/wf_seed_1.cwl Branch/Commit ID: 1bf7dc7b03ea3c64e54375cc5c3767849a801000