Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	xenbase-sra-to-fastq-pe.cwl	https://github.com/datirium/workflows.git Path: subworkflows/xenbase-sra-to-fastq-pe.cwl Branch/Commit ID: 6bf56698c6fe6e781723dea32bc922b91ef49cf3
	mixed_library_metrics.cwl	https://github.com/nci-gdc/gdc-dnaseq-cwl.git Path: workflows/dnaseq/mixed_library_metrics.cwl Branch/Commit ID: 0d3fdddeae5a398e476d91aa98766965866d8eae
	extract_readgroups_bam.cwl	https://github.com/nci-gdc/gdc-dnaseq-cwl.git Path: workflows/bamfastq_align/extract_readgroups_bam.cwl Branch/Commit ID: 0d3fdddeae5a398e476d91aa98766965866d8eae
	Run tRNAScan	https://github.com/ncbi/pgap.git Path: bacterial_trna/wf_trnascan.cwl Branch/Commit ID: be5ae41801b19ebc69a2889d8fdb39e8e2359611
	spurious_annot pass2	https://github.com/ncbi/pgap.git Path: spurious_annot/wf_spurious_annot_pass2.cwl Branch/Commit ID: be5ae41801b19ebc69a2889d8fdb39e8e2359611
	Create Genomic Collection for Bacterial Pipeline, ASN.1 input	https://github.com/ncbi/pgap.git Path: genomic_source/wf_genomic_source_asn.cwl Branch/Commit ID: be5ae41801b19ebc69a2889d8fdb39e8e2359611
	Bacterial Annotation, pass 4, blastp-based functional annotation (second pass)	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_bacterial_annot_pass4.cwl Branch/Commit ID: be5ae41801b19ebc69a2889d8fdb39e8e2359611
	Bacterial Annotation, pass 3, structural annotation, functional annotation: ab initio GeneMark, by WP, by HMM (second pass)	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_bacterial_annot_pass3.cwl Branch/Commit ID: be5ae41801b19ebc69a2889d8fdb39e8e2359611
	spurious_annot	https://github.com/ncbi/pgap.git Path: spurious_annot/wf_spurious_annot_pass1.cwl Branch/Commit ID: be5ae41801b19ebc69a2889d8fdb39e8e2359611
	gp_makeblastdb	https://github.com/ncbi/pgap.git Path: progs/gp_makeblastdb.cwl Branch/Commit ID: be5ae41801b19ebc69a2889d8fdb39e8e2359611