Explore Workflows

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Graph	Name	Retrieved From	View
	l7g-liftover.cwl	https://github.com/curoverse/l7g.git Path: cwl-version/experimental/l7g-tile-assembly/tile-assembly-hg19/l7g-liftover.cwl Branch/Commit ID: 6b70fbf2472253aae590fcc969550e1f165c6ab1
	extract_readgroup_fastq_pe.cwl	https://github.com/nci-gdc/gdc-dnaseq-cwl.git Path: workflows/bamfastq_align/extract_readgroup_fastq_pe.cwl Branch/Commit ID: 0d3fdddeae5a398e476d91aa98766965866d8eae
	01-qc-se.cwl ChIP-seq 01 QC - reads: SE	https://github.com/alexbarrera/GGR-cwl.git Path: v1.0/ChIP-seq_pipeline/01-qc-se.cwl Branch/Commit ID: 0c7a51100908034e82ac008ac206d94ff8b011cd
	xenbase-sra-to-fastq-se.cwl	https://github.com/datirium/workflows.git Path: subworkflows/xenbase-sra-to-fastq-se.cwl Branch/Commit ID: 7a4593d2fa5b2fcbedc9219dc5687a4bc5aea66a
	module-6	https://github.com/mskcc/roslin-variant.git Path: setup/cwl/module-6.cwl Branch/Commit ID: 45f7695e28fa2185944fd220834eeac2e27d53c7
	integrity.cwl	https://github.com/NCI-GDC/gdc-dnaseq-cwl.git Path: workflows/mirnaseq/integrity.cwl Branch/Commit ID: 2f7c0e92e7b88b57b86602f11c595661c374008a
	exome alignment and somatic variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/somatic_exome.cwl Branch/Commit ID: ad65dc1dfff9afa5077f498b85e699716c47f6cb
	01-qc-se.cwl RNA-seq 01 QC - reads: SE	https://github.com/alexbarrera/GGR-cwl.git Path: v1.0/RNA-seq_pipeline/01-qc-se.cwl Branch/Commit ID: 0c7a51100908034e82ac008ac206d94ff8b011cd
	03-map-se.cwl ATAC-seq 03 mapping - reads: SE	https://github.com/alexbarrera/GGR-cwl.git Path: v1.0/ATAC-seq_pipeline/03-map-se.cwl Branch/Commit ID: 3a4314c66c1eb090e656af5a0d388cec87d65318
	Unaligned BAM to BQSR and VCF	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_to_bqsr.cwl Branch/Commit ID: c235dc6d623879a6c4f5fb307f545c9806eb2d23