Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph umi duplex alignment workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/duplex_alignment.cwl

Branch/Commit ID: a3e26136043c03192c38c335316d2d36e3e67478
workflow graph structural-variants.cwl

https://github.com/mskcc/roslin-variant.git

Path: setup/cwl/modules/structural-variants.cwl

Branch/Commit ID: 8766def7f70f329e2a4c56239f141685a873599b
workflow graph umi molecular alignment workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/molecular_alignment.cwl

Branch/Commit ID: 5a4fed24f01f6d7c7ce1f595b272d82d97d4f9bd
workflow graph Exome QC workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/qc_exome.cwl

Branch/Commit ID: ffab5424bb8b5905aecf6f8e2e6387da7f3df562
workflow graph Varscan Workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/varscan_germline.cwl

Branch/Commit ID: 67f56d3b9c70ad56019ed8aa8d50a128e02be43b
workflow graph Subworkflow that runs cnvkit in single sample mode and returns a vcf file

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/cnvkit_single_sample.cwl

Branch/Commit ID: a3e26136043c03192c38c335316d2d36e3e67478
workflow graph merge and annotate svs with population allele freq and vep

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/merge_svs.cwl

Branch/Commit ID: a3e26136043c03192c38c335316d2d36e3e67478
workflow graph default-dir5.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/default-dir5.cwl

Branch/Commit ID: fec7a10466a26e376b14181a88734983cfb1b8cb
workflow graph xenbase-fastq-bowtie-bigwig-se-pe.cwl

https://github.com/datirium/workflows.git

Path: subworkflows/xenbase-fastq-bowtie-bigwig-se-pe.cwl

Branch/Commit ID: ae2b231562822ed66b8e35e5452ae7f012416b2a
workflow graph gunzip-workflow.cwl

https://github.com/NAL-i5K/CWL_Common-Workflow-Language.git

Path: demo_workflow4/gunzip-workflow.cwl

Branch/Commit ID: abbb81823195194bb8f1a9ddc5ba8efc2be86cdf