Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Functional analyis of sequences that match the 16S SSU
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https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git
Path: workflows/16S_taxonomic_analysis.cwl Branch/Commit ID: master |
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varscan somatic workflow
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https://github.com/genome/cancer-genomics-workflow.git
Path: varscan/varscan.cwl Branch/Commit ID: toil_compatibility |
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workflow-phmmer-blast.cwl
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https://github.com/ebi-wp/webservice-cwl.git
Path: workflows/workflow-phmmer-blast.cwl Branch/Commit ID: master |
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wf-variantcall.cwl
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https://github.com/bcbio/test_bcbio_cwl.git
Path: prealign/prealign-workflow/wf-variantcall.cwl Branch/Commit ID: master |
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Conversion and compression of RDF files
Workflow to convert a RDF file to the HDT format and GZIP compress it for long term storage |
https://git.wur.nl/unlock/cwl.git
Path: cwl/workflows/workflow_toHDT_compression.cwl Branch/Commit ID: master |
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hmmsearch_wnode and gpx_qdump combined workflow to apply scatter/gather
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https://github.com/ncbi/pgap.git
Path: task_types/tt_hmmsearch_wnode_plus_qdump.cwl Branch/Commit ID: test |
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Find reads with predicted coding sequences above 60 AA in length
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/orf_prediction.cwl Branch/Commit ID: 930a2cf |
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super-enhancer.cwl
Both `islands_file` and `islands_control_file` should be produced by the same cwl tool (iaintersect.cwl or macs2-callpeak-biowardrobe-only.cwl) |
https://github.com/Barski-lab/workflows.git
Path: workflows/super-enhancer.cwl Branch/Commit ID: master |
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beast-2step-workflow.cwl
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https://github.com/GusEllerm/CWL_workflows.git
Path: workflows/BEAST_examples/beast-2step-workflow.cwl Branch/Commit ID: main |
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io-int-default-tool-and-wf.cwl
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https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/io-int-default-tool-and-wf.cwl Branch/Commit ID: master |
