Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph EMG pipeline v3.0 (paired end version)

https://github.com/farahzkhan/ebi-metagenomics-cwl.git

Path: workflows/emg-pipeline-v3-paired.cwl

Branch/Commit ID: master
workflow graph wf.cwl#VDJ_Assemble_and_Annotate_Contigs_TCR.cwl

https://github.com/aheinzel/tmp_rhapsody_for_cwl_vis.git

Path: wf.cwl

Branch/Commit ID: main

Packed ID: VDJ_Assemble_and_Annotate_Contigs_TCR.cwl
workflow graph hipepipe.cwl

https://github.com/vuillaut/cookbooks.git

Path: CWL-pipeline/hipepipe.cwl

Branch/Commit ID: master
workflow graph bams2gvcf.woBQSR.multisamples.cwl

https://github.com/ddbj/human-reseq.git

Path: Workflows/bams2gvcf.woBQSR.multisamples.cwl

Branch/Commit ID: master
workflow graph germline-gpu-v4.0.1.cwl

https://github.com/NCGM-genome/WGSpipeline.git

Path: Workflows/germline-gpu-v4.0.1.cwl

Branch/Commit ID: main
workflow graph star_samtools_miso.cwl

https://github.com/rawgene/cwl.git

Path: workflows/star_samtools_miso.cwl

Branch/Commit ID: master
workflow graph abundance

abundace profiles from annotated files, for protein and/or rna

 https://github.com/MG-RAST/pipeline.git

Path: CWL/Workflows/abundance.workflow.cwl

Branch/Commit ID: master
workflow graph prefetch_fastq.cwl

Worfklow combining an SRA fetch from NCBI with a fastq-dump cmd

https://github.com/svonworl/bio-cwl-tools.git

Path: sratoolkit/prefetch_fastq.cwl

Branch/Commit ID: release
workflow graph EMG QC workflow, (paired end version). Benchmarking with MG-RAST expt.

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/emg-qc-paired.cwl

Branch/Commit ID: 0cf06f1
workflow graph SPRM pipeline

https://github.com/hubmapconsortium/sprm.git

Path: pipeline.cwl

Branch/Commit ID: d42d6f5