Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Bacterial Annotation, pass 1, genemark training, by HMMs (first pass)

https://github.com/ncbi/pgap.git

Path: bacterial_annot/wf_bacterial_annot_pass1.cwl

Branch/Commit ID: f100a34cf4ffb0e81c468dc10005068a53ec0f75
workflow graph extract_readgroup_fastq_se_http.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/extract_readgroup_fastq_se_http.cwl

Branch/Commit ID: 3cb464a3a5c39cc060cd23d9c60918bc9ffb169b
workflow graph wf-variantcall.cwl

https://github.com/bcbio/bcbio_validation_workflows.git

Path: SGDP-recall-CGC/SGDP-recall-cgc/wf-variantcall.cwl

Branch/Commit ID: afd674a6d64fb4e115c0b3fe95b7bb1b73ec69a9
workflow graph wf-alignment.cwl

https://github.com/bcbio/bcbio_validation_workflows.git

Path: NA24385-sv/NA24385-sv-workflow/wf-alignment.cwl

Branch/Commit ID: afd674a6d64fb4e115c0b3fe95b7bb1b73ec69a9
workflow graph exome alignment with qc

https://github.com/genome/cancer-genomics-workflow.git

Path: exome_alignment.cwl

Branch/Commit ID: e497d1553498eb1c6daecf242ed4fa1375a892fd
workflow graph pcr-bottleneck-coef.cwl

ChIP-seq - map - PCR Bottleneck Coefficients

 https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/map/pcr-bottleneck-coef.cwl

Branch/Commit ID: 71146d85ae7f0c562ec0d454fbbb7085a827356e
workflow graph main-NA24385-sv.cwl

https://github.com/bcbio/bcbio_validation_workflows.git

Path: NA24385-sv/NA24385-sv-workflow/main-NA24385-sv.cwl

Branch/Commit ID: afd674a6d64fb4e115c0b3fe95b7bb1b73ec69a9
workflow graph module-2

https://github.com/mskcc/roslin-variant.git

Path: setup/cwl/module-2.cwl

Branch/Commit ID: ec73c7be10c97ebd39e3f87ac3601fff58e24d3f
workflow graph cow_test_workflow.cwl

https://github.com/TMCantwell/CWL_test.git

Path: cow_test_workflow.cwl

Branch/Commit ID: eb06aea6b04c3d1311cf53978f3877be2c322853
workflow graph RNASelector as a CWL workflow

https://doi.org/10.1007/s12275-011-1213-z

 https://github.com/farahzkhan/ebi-metagenomics-cwl.git

Path: workflows/rna-selector.cwl

Branch/Commit ID: 6430df56f7345f837d3f9c3f7fb5af5aa9dadc90