Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph RNA-Seq alignment and transcript/gene abundance workflow - first-stranded data

https://github.com/genome/cancer-genomics-workflow.git

Path: rnaseq/workflow.cwl

Branch/Commit ID: e027d487e5cefba4f446f2036b933955608dbc31
workflow graph bwa_pe.cwl

https://github.com/nci-gdc/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/bwa_pe.cwl

Branch/Commit ID: b110a23e2efaaadfd4feca4f9e130946d1c5418d
workflow graph collate_unique_SSU_headers.cwl

https://github.com/farahzkhan/ebi-metagenomics-cwl.git

Path: tools/collate_unique_SSU_headers.cwl

Branch/Commit ID: 6430df56f7345f837d3f9c3f7fb5af5aa9dadc90
workflow graph metrics.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/mirnaseq/metrics.cwl

Branch/Commit ID: 3cb464a3a5c39cc060cd23d9c60918bc9ffb169b
workflow graph chksum_seqval_wf_paired_fq.cwl

https://github.com/cancerit/workflow-seq-import.git

Path: cwls/chksum_seqval_wf_paired_fq.cwl

Branch/Commit ID: 4194fb642223de35ec1c814a4e1591f9785dd561
workflow graph default-dir5.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/default-dir5.cwl

Branch/Commit ID: d6000d32f6c8fbd26421a2d30d79b28901d58fb0
workflow graph integrity.cwl

https://github.com/nci-gdc/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/integrity.cwl

Branch/Commit ID: 3cb464a3a5c39cc060cd23d9c60918bc9ffb169b
workflow graph anonymize.cwl

Replace named entities in a directory of text files. Can be used as part of an data anonymization workflow.

https://github.com/WhatWorksWhenForWhom/nlppln.git

Path: nlppln/cwl/anonymize.cwl

Branch/Commit ID: e9c64aea28d755de9f2ef4a7025c96e880e4381f
workflow graph bwa_pe.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/bwa_pe.cwl

Branch/Commit ID: 3cb464a3a5c39cc060cd23d9c60918bc9ffb169b
workflow graph EMG QC workflow, (paired end version). Benchmarking with MG-RAST expt.

https://github.com/proteinswebteam/ebi-metagenomics-cwl.git

Path: workflows/emg-qc-single.cwl

Branch/Commit ID: cac44f2cf14110fde9951161c663c4525772f616