Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph hmmsearch_wnode and gpx_qdump combined workflow to apply scatter/gather

https://github.com/ncbi/pgap.git

Path: task_types/tt_hmmsearch_wnode_plus_qdump.cwl

Branch/Commit ID: 13b411d94a568e52797ba936732dc65f1a91bd41

workflow graph extract_readgroup_fastq_se.cwl

https://github.com/nci-gdc/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/extract_readgroup_fastq_se.cwl

Branch/Commit ID: cf2e9d7c3cc87ce97a1fbf73fad574b170fedcfb

workflow graph extract_gencoll_ids

https://github.com/ncbi-gpipe/pgap.git

Path: task_types/tt_extract_gencoll_ids.cwl

Branch/Commit ID: 41dfc42a730087189122a2f74b2f547a4665a225

workflow graph exome alignment and germline variant detection

https://github.com/genome/cancer-genomics-workflow.git

Path: germline_exome_workflow.cwl

Branch/Commit ID: ab3cc1f460146c60d7de417508f0c1ea70506e6a

workflow graph chipseq-pe.cwl

Runs ChIP-Seq BioWardrobe basic analysis with paired-end input data files.

https://github.com/Barski-lab/workflows.git

Path: workflows/chipseq-pe.cwl

Branch/Commit ID: ca2dbb71d0537b1d93a8bd44719250cf8949b157

workflow graph move_and_validate_interleaved_fq.cwl

https://github.com/cancerit/workflow-seq-import.git

Path: cwls/move_and_validate_interleaved_fq.cwl

Branch/Commit ID: a20c4cf8691111b1c526b216b5bf489bf5e4882c

workflow graph chksum_seqval_wf_interleaved_fq.cwl

https://github.com/cancerit/workflow-seq-import.git

Path: cwls/chksum_seqval_wf_interleaved_fq.cwl

Branch/Commit ID: a20c4cf8691111b1c526b216b5bf489bf5e4882c

workflow graph Transcriptome assembly workflow

https://github.com/mscheremetjew/workflow-is-cwl.git

Path: workflows/TranscriptomeAssembly-wf.cwl

Branch/Commit ID: 004e4c3d24ddc63159dfb78577bdc0c90818de8d

workflow graph chksum_seqval_wf_paired_fq.cwl

https://github.com/cancerit/workflow-seq-import.git

Path: cwls/chksum_seqval_wf_paired_fq.cwl

Branch/Commit ID: a20c4cf8691111b1c526b216b5bf489bf5e4882c

workflow graph move_and_validate_interleaved_fq.cwl

https://github.com/cancerit/workflow-seq-import.git

Path: cwls/move_and_validate_interleaved_fq.cwl

Branch/Commit ID: 9cf4934702760cfde7b8aed1b7145ea32f8a82ec