Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Unaligned to aligned BAM

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/align.cwl

Branch/Commit ID: bcc6adaf15035f5ce6fc851e27b1173b0fd20c1c
workflow graph scatter GATK HaplotypeCaller over intervals

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/gatk_haplotypecaller_iterator.cwl

Branch/Commit ID: 1249b5d4e23d57ca5e3b8ad6d8e5f10ddb019f68
workflow graph 01-qc-pe.cwl

RNA-seq 01 QC - reads: PE

 https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/RNA-seq_pipeline/01-qc-pe.cwl

Branch/Commit ID: 0c7a51100908034e82ac008ac206d94ff8b011cd
workflow graph count-lines7-wf.cwl

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/count-lines7-wf.cwl

Branch/Commit ID: 4c905b830371eee45188a53510ba0ee9113fd4c8
workflow graph xenbase-fastq-bowtie-bigwig-se-pe.cwl

https://github.com/datirium/workflows.git

Path: subworkflows/xenbase-fastq-bowtie-bigwig-se-pe.cwl

Branch/Commit ID: e627079d8431e4f1f1c7531af1ca2e7dcc684b90
workflow graph exome alignment and germline variant detection

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/germline_exome.cwl

Branch/Commit ID: bcc6adaf15035f5ce6fc851e27b1173b0fd20c1c
workflow graph filter-pcr-artifacts.cwl

DNase-seq - map - Filter PCR Artifacts

 https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/map/filter-pcr-artifacts.cwl

Branch/Commit ID: 0c7a51100908034e82ac008ac206d94ff8b011cd
workflow graph pcr-bottleneck-coef.cwl

ChIP-seq - map - PCR Bottleneck Coefficients

 https://github.com/Duke-GCB/GGR-cwl.git

Path: v1.0/map/pcr-bottleneck-coef.cwl

Branch/Commit ID: 46e5078373d4668019485d27c71770aec9dd9f0e
workflow graph count-lines8-wf.cwl

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/count-lines8-wf.cwl

Branch/Commit ID: 478c2ffc09fb189c4f36ccb82aad945b3db5f9b3
workflow graph cwlsite.cwl

https://github.com/common-workflow-language/cwl-website.git

Path: site/cwlsite.cwl

Branch/Commit ID: 374eeb78afa2f23e15779a88d32141cc4237a5c9