Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Apply filters to VCF file

https://github.com/genome/cancer-genomics-workflow.git

Path: detect_variants/filter_vcf.cwl

Branch/Commit ID: eb565eac07209017b12ed79057b40cbf44fb6a0d
workflow graph pindel parallel workflow

https://github.com/genome/cancer-genomics-workflow.git

Path: pindel/workflow.cwl

Branch/Commit ID: eb565eac07209017b12ed79057b40cbf44fb6a0d
workflow graph predict-workflow.cwl

https://github.com/Duke-GCB/iMADS-worker.git

Path: predict_service/predict-workflow.cwl

Branch/Commit ID: 8e56a3e51145e2651d454b51b95c4585de7e7ec5
workflow graph conditional_markduplicates.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/conditional_markduplicates.cwl

Branch/Commit ID: 3cb464a3a5c39cc060cd23d9c60918bc9ffb169b
workflow graph Varscan Workflow

https://github.com/genome/cancer-genomics-workflow.git

Path: varscan/workflow.cwl

Branch/Commit ID: eb565eac07209017b12ed79057b40cbf44fb6a0d
workflow graph WGS QC workflow

https://github.com/genome/cancer-genomics-workflow.git

Path: qc/workflow_wgs.cwl

Branch/Commit ID: eb565eac07209017b12ed79057b40cbf44fb6a0d
workflow graph Unaligned BAM to BQSR and VCF

https://github.com/genome/cancer-genomics-workflow.git

Path: unaligned_bam_to_bqsr/workflow.cwl

Branch/Commit ID: eb565eac07209017b12ed79057b40cbf44fb6a0d
workflow graph Detect DoCM variants

https://github.com/genome/cancer-genomics-workflow.git

Path: docm/germline_workflow.cwl

Branch/Commit ID: eb565eac07209017b12ed79057b40cbf44fb6a0d
workflow graph Varscan Workflow

https://github.com/genome/cancer-genomics-workflow.git

Path: varscan/germline_workflow.cwl

Branch/Commit ID: eb565eac07209017b12ed79057b40cbf44fb6a0d
workflow graph amplicon_metrics.cwl

https://github.com/nci-gdc/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/amplicon_metrics.cwl

Branch/Commit ID: 3cb464a3a5c39cc060cd23d9c60918bc9ffb169b