Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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conditional_markduplicates.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/conditional_markduplicates.cwl Branch/Commit ID: 3cb464a3a5c39cc060cd23d9c60918bc9ffb169b |
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Varscan Workflow
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https://github.com/genome/cancer-genomics-workflow.git
Path: varscan/workflow.cwl Branch/Commit ID: eb565eac07209017b12ed79057b40cbf44fb6a0d |
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WGS QC workflow
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https://github.com/genome/cancer-genomics-workflow.git
Path: qc/workflow_wgs.cwl Branch/Commit ID: eb565eac07209017b12ed79057b40cbf44fb6a0d |
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Unaligned BAM to BQSR and VCF
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https://github.com/genome/cancer-genomics-workflow.git
Path: unaligned_bam_to_bqsr/workflow.cwl Branch/Commit ID: eb565eac07209017b12ed79057b40cbf44fb6a0d |
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Detect DoCM variants
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https://github.com/genome/cancer-genomics-workflow.git
Path: docm/germline_workflow.cwl Branch/Commit ID: eb565eac07209017b12ed79057b40cbf44fb6a0d |
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Varscan Workflow
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https://github.com/genome/cancer-genomics-workflow.git
Path: varscan/germline_workflow.cwl Branch/Commit ID: eb565eac07209017b12ed79057b40cbf44fb6a0d |
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amplicon_metrics.cwl
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https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/amplicon_metrics.cwl Branch/Commit ID: 3cb464a3a5c39cc060cd23d9c60918bc9ffb169b |
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status_postgres.cwl
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https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/fastq_readgroup_stats/status_postgres.cwl Branch/Commit ID: 3cd06184444bb85e9773a3e7dc548c6dd3bdaccb |
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umi molecular alignment fastq workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/umi_molecular_alignment.cwl Branch/Commit ID: d297528e53b6c1ecb69b1ab27b8e03323b4463ad |
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extract_readgroup_fastq_pe.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/extract_readgroup_fastq_pe.cwl Branch/Commit ID: 3cb464a3a5c39cc060cd23d9c60918bc9ffb169b |
