Explore Workflows
View already parsed workflows here or click here to add your own
Graph | Name | Retrieved From | View |
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RNA-Seq alignment and transcript/gene abundance workflow
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![]() Path: rnaseq/workflow.cwl Branch/Commit ID: eb565eac07209017b12ed79057b40cbf44fb6a0d |
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Trim and reformat reads (single and paired end version)
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![]() Path: workflows/trim_and_reformat_reads.cwl Branch/Commit ID: ecf044f3a5a7589cb2238487a19f22863c2bcdb1 |
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transform_mirna.cwl
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![]() Path: workflows/mirnaseq/transform_mirna.cwl Branch/Commit ID: 3cb464a3a5c39cc060cd23d9c60918bc9ffb169b |
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extract_readgroup_fastq_pe_http.cwl
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![]() Path: workflows/bamfastq_align/extract_readgroup_fastq_pe_http.cwl Branch/Commit ID: a57b8f0d8708078e87f13297e065d72db10e38a0 |
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etl.cwl
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![]() Path: workflows/fastq_readgroup_stats/etl.cwl Branch/Commit ID: 3cb464a3a5c39cc060cd23d9c60918bc9ffb169b |
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guesser.cwl
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![]() Path: cwl-scripts/guesser/guesser.cwl Branch/Commit ID: 9086941cb28c81449c33ac243d78aacf4005110d |
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readgroup_fastq_se.cwl
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![]() Path: workflows/bamfastq_align/readgroup_fastq_se.cwl Branch/Commit ID: 3cb464a3a5c39cc060cd23d9c60918bc9ffb169b |
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any-type-compat.cwl
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![]() Path: cwltool/schemas/v1.0/v1.0/any-type-compat.cwl Branch/Commit ID: 984ad48495f84d3a016cb41a2d1ce7b303248364 |
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Hello World
Outputs a message using echo |
![]() Path: workflows/hello/hello-param.cwl Branch/Commit ID: 0c550e823d739079a25e171fc6a6253bf2755c18 |
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Hello World
Puts a message into a file using echo |
![]() Path: src/test/resources/cwl/hello/hello-param.cwl Branch/Commit ID: f2ce1841a420bc6966f7e23a6d0964f5adf068ae Packed ID: main |