Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Transcripts annotation workflow

https://github.com/stain/workflow-is-cwl.git

Path: workflows/TranscriptsAnnotation-i5only-wf.cwl

Branch/Commit ID: avoid-spaces
workflow graph tRNA_selection.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/tRNA_selection.cwl

Branch/Commit ID: 708fd97
workflow graph Genome conversion and annotation

Workflow for genome annotation from EMBL format

 https://git.wur.nl/unlock/cwl.git

Path: cwl/workflows/workflow_sapp_others.cwl

Branch/Commit ID: master
workflow graph hc-distr.cwl

https://github.com/sentieon/sentieon-cwl.git

Path: stage/hc-distr.cwl

Branch/Commit ID: master
workflow graph Whole genome alignment and somatic variant detection

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/somatic_wgs.cwl

Branch/Commit ID: master
workflow graph MACE ChIP-exo peak caller workflow for single-end samples

This workflow execute peak caller and QC from ChIP-exo for single-end samples using MACE

 https://github.com/ncbi/cwl-ngs-workflows-cbb.git

Path: workflows/ChIP-exo/peak-caller-MACE-SE.cwl

Branch/Commit ID: master
workflow graph Nested workflow example

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/double-nested.cwl

Branch/Commit ID: main
workflow graph main-SGDP-recall.cwl

https://github.com/bcbio/bcbio_validation_workflows.git

Path: SGDP-recall-CGC/SGDP-recall-cgc/main-SGDP-recall.cwl

Branch/Commit ID: master
workflow graph predict-workflow.cwl

https://github.com/duke-gcb/imads-worker.git

Path: predict_service/predict-workflow.cwl

Branch/Commit ID: master
workflow graph EMG assembly for paired end Illumina

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/emg-pipeline-v4-assembly-metaSPAdes.cwl

Branch/Commit ID: master