Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph presto_nosort.cwl

https://github.com/eosc-lofar/presto-cwl.git

Path: presto_nosort.cwl

Branch/Commit ID: visualise
workflow graph nested.cwl

https://github.com/giannisdoukas/CWLJNIKernel.git

Path: tests/cwl/nested.cwl

Branch/Commit ID: master
workflow graph call_cnv.cwl

https://github.com/mskcc/Innovation-Pipeline.git

Path: workflows/subworkflows/call_cnv.cwl

Branch/Commit ID: master
workflow graph decentralizedFL.cwl

https://github.com/yuandou168/DecentralizedFL-CWL.git

Path: CWL_Workflow/decentralizedFL.cwl

Branch/Commit ID: main
workflow graph snps_and_indels.cwl

https://github.com/mskcc/Innovation-Pipeline.git

Path: workflows/subworkflows/snps_and_indels.cwl

Branch/Commit ID: master
workflow graph multiple_input_feature_requirement.cwl

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/multiple_input_feature_requirement.cwl

Branch/Commit ID: main
workflow graph example.cwl

Example CWL workflow that uses some advanced features

https://github.com/mskcc/pluto-cwl.git

Path: cwl/example.cwl

Branch/Commit ID: master
workflow graph gk--store-xvs-row.cwl

https://github.com/vdikan/cwl-gk-thermal.git

Path: cwl/gk--store-xvs-row.cwl

Branch/Commit ID: master
workflow graph snpeff-workflow.cwl

Annotate variants provided in a VCF using SnpEff

https://github.com/cr-ste-justine/chujs-alignment-workflow.git

Path: tools/snpeff-workflow.cwl

Branch/Commit ID: dev
workflow graph rnaseq-alignment-quantification

This workflow retrieve SRA fastqc data and execute QC, alignment and quantification from TPMCalculator

 https://github.com/ncbi/cwl-ngs-workflows-cbb.git

Path: workflows/RNA-Seq/rnaseq-quantification-qc.cwl

Branch/Commit ID: master