Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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rw-distr.cwl
run scatter-gather for rw stage |
https://github.com/sentieon/sentieon-cwl.git
Path: stage/rw-distr.cwl Branch/Commit ID: master |
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final_filtering
Final filtering |
https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/cwl/subworkflows/final_filtering.cwl Branch/Commit ID: 1.0.6 |
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cluster_blastp_wnode and gpx_qdump combined
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https://github.com/ncbi/pgap.git
Path: task_types/tt_cluster_and_qdump.cwl Branch/Commit ID: dev |
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pindel parallel workflow
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https://github.com/hamid58b/cancer-genomics-workflow.git
Path: pindel/workflow.cwl Branch/Commit ID: master |
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kallisto-demo.cwl
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https://github.com/common-workflow-language/workflows.git
Path: workflows/kallisto-demo.cwl Branch/Commit ID: master |
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test_workflow.cwl
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https://github.com/jniestroy/cwl_parser.git
Path: workflows/test_workflow.cwl Branch/Commit ID: master |
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preprocessor_for_oxog.cwl
This workflow will perform preprocessing steps on VCFs for the OxoG/Variantbam/Annotation workflow. |
https://github.com/icgc-tcga-pancancer/pcawg-oxog-filter.git
Path: preprocessor_for_oxog.cwl Branch/Commit ID: develop |
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Transcripts annotation workflow
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https://github.com/stain/workflow-is-cwl.git
Path: workflows/TranscriptsAnnotation-i5only-wf.cwl Branch/Commit ID: avoid-spaces |
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tRNA_selection.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/tRNA_selection.cwl Branch/Commit ID: 708fd97 |
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Genome conversion and annotation
Workflow for genome annotation from EMBL format |
https://git.wur.nl/unlock/cwl.git
Path: cwl/workflows/workflow_sapp_others.cwl Branch/Commit ID: master |
