Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Per-region pindel
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https://github.com/litd/analysis-workflows.git
Path: definitions/subworkflows/pindel_cat.cwl Branch/Commit ID: 193b8de694f262ad55c7635a603c20c124748583 |
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strelka workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/strelka_and_post_processing.cwl Branch/Commit ID: ac87e0584685fe04e4010ecd77ae4f055f21d788 |
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Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/pvacseq.cwl Branch/Commit ID: ac87e0584685fe04e4010ecd77ae4f055f21d788 |
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count-lines6-wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/count-lines6-wf.cwl Branch/Commit ID: 89ccbfc53ff3bb6abe2eb90bb7e0091c54c18f5c |
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workflow.cwl
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https://github.com/NAL-i5K/Organism_Onboarding.git
Path: flow_md5checksums/workflow.cwl Branch/Commit ID: c73baa5e10f074be767be0ff8691fdbc2047ef4a |
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adapter for sequence_align_and_tag
Some workflow engines won't stage files in our nested structure, so parse it out here |
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/sequence_align_and_tag_adapter.cwl Branch/Commit ID: 700e73aaed6db1ad538dd27b2e1709f436ad3edb |
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mutect parallel workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/mutect.cwl Branch/Commit ID: 700e73aaed6db1ad538dd27b2e1709f436ad3edb |
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kmer_top_n_extract
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_top_n_extract.cwl Branch/Commit ID: 0788fbf0432567fd4fc131c6757904841ccd72ba |
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workflow.cwl
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https://github.com/NAL-i5K/Organism_Onboarding.git
Path: flow_create_genomics-workspace_yml/flow_create_yml/workflow.cwl Branch/Commit ID: c73baa5e10f074be767be0ff8691fdbc2047ef4a |
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Detect DoCM variants
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https://github.com/litd/analysis-workflows.git
Path: definitions/subworkflows/docm_germline.cwl Branch/Commit ID: 193b8de694f262ad55c7635a603c20c124748583 |
