Explore Workflows

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/schemadef-wf.cwl

Branch/Commit ID: 596aab620489cd2611f4bc1d9a4fc914ddf34514

The main workflow that produces two reproducible peaks via IDR given two eCLIP samples (1 input, 1 IP each).

https://github.com/YeoLab/merge_peaks.git

Path: cwl/wf_get_reproducible_eclip_peaks.cwl

Branch/Commit ID: f523a4c9594b64dc8bc0b1bd10759e36bfcc4798

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/step-valuefrom-wf.cwl

Branch/Commit ID: 596aab620489cd2611f4bc1d9a4fc914ddf34514

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/echo-wf-default.cwl

Branch/Commit ID: bbe20f54deea92d9c9cd38cb1f23c4423133d3de

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/step-valuefrom2-wf.cwl

Branch/Commit ID: f5f1a7122c2e82376b4eeef7b97aa35ffa59c1d5

https://github.com/curoverse/l7g.git

Path: cwl-version/convert2fastj/gff_version/cwl/tiling_convert2fastj.cwl

Branch/Commit ID: 4765da6828edaa70875c70584673cdaaead72c7b

https://github.com/datirium/workflows.git

Path: subworkflows/xenbase-sra-to-fastq-se.cwl

Branch/Commit ID: e284e3f6dff25037b209895c52f2abd37a1ce1bf

https://github.com/ncbi/pgap.git

Path: task_types/tt_blastp_wnode_naming.cwl

Branch/Commit ID: 6a29751f2b16659c1592f1e94837c989e68f3b8b

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/count-lines8-wf.cwl

Branch/Commit ID: bbe20f54deea92d9c9cd38cb1f23c4423133d3de

Remove and trim low quality reads from fastq files. Return fasta files with reads passed and reads removed.

https://github.com/MG-RAST/pipeline.git

Path: CWL/Workflows/preprocess-fastq.workflow.cwl

Branch/Commit ID: a14af40f76ed6108d6205984e03dd0870b0141eb