Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph protein_extract

https://github.com/ncbi/pgap.git

Path: progs/protein_extract.cwl

Branch/Commit ID: be32f1363f9a9a9247d738e9593b207e9c5172c8
workflow graph nestedworkflows.cwl

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/examples/nestedworkflows.cwl

Branch/Commit ID: 8d8512061f2367c90aac67bcbf92af1061b4af59
workflow graph PGAP Pipeline, simple user input, PGAPX-134

PGAP pipeline for external usage, powered via containers, simple user input: (FASTA + yaml only, no template)

https://github.com/ncbi/pgap.git

Path: pgap.cwl

Branch/Commit ID: be32f1363f9a9a9247d738e9593b207e9c5172c8
workflow graph exome alignment with qc

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/exome_alignment.cwl

Branch/Commit ID: 88f1e02b261bf9ce882eba306b6245c64328632b
workflow graph unix_align_workflow.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/unix/unix_align_workflow.cwl

Branch/Commit ID: 10c05314890db2b5bd85c3d338d7f5657fe0c646
workflow graph hisat2_htseq_dexseq.cwl

https://github.com/rawgene/cwl.git

Path: workflows/hisat2_htseq_dexseq.cwl

Branch/Commit ID: ff0e5dfe44fb85900b5563ab340de8ad3d952eb5
workflow graph varscan somatic workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/varscan.cwl

Branch/Commit ID: a93be3183c2218ee50f13ae2675dd1cde563fdbc
workflow graph 1st-workflow.cwl

https://github.com/common-workflow-language/user_guide.git

Path: _includes/cwl/22-nested-workflows/1st-workflow.cwl

Branch/Commit ID: c72d47de92bf95f0fed409dcaacb05b6905224b1
workflow graph bgzip and index VCF

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/bgzip_and_index.cwl

Branch/Commit ID: a93be3183c2218ee50f13ae2675dd1cde563fdbc
workflow graph nestedworkflows.cwl

https://github.com/common-workflow-language/user_guide.git

Path: _includes/cwl/22-nested-workflows/nestedworkflows.cwl

Branch/Commit ID: c72d47de92bf95f0fed409dcaacb05b6905224b1