Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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pindel parallel workflow
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https://github.com/litd/analysis-workflows.git
Path: definitions/subworkflows/pindel.cwl Branch/Commit ID: 0d4e517d7c1c6deb0db02d3746c8ed4db841bd57 |
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strelka workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/strelka_and_post_processing.cwl Branch/Commit ID: 3f3b186da9bf82a5e2ae74ba27aef35a46174ebe |
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mutect parallel workflow
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https://github.com/litd/analysis-workflows.git
Path: definitions/subworkflows/mutect.cwl Branch/Commit ID: 0d4e517d7c1c6deb0db02d3746c8ed4db841bd57 |
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Apply filters to VCF file
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https://github.com/litd/analysis-workflows.git
Path: definitions/subworkflows/filter_vcf.cwl Branch/Commit ID: 0d4e517d7c1c6deb0db02d3746c8ed4db841bd57 |
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Bacterial Annotation, pass 2, blastp-based functional annotation (first pass)
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https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass2.cwl Branch/Commit ID: 4533a5e930305c674057bc4cf5dda4f39d39b5df |
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Detect Docm variants
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https://github.com/litd/analysis-workflows.git
Path: definitions/subworkflows/docm_cle.cwl Branch/Commit ID: 0d4e517d7c1c6deb0db02d3746c8ed4db841bd57 |
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Apply filters to VCF file
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/filter_vcf.cwl Branch/Commit ID: 3f3b186da9bf82a5e2ae74ba27aef35a46174ebe |
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Detect DoCM variants
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/docm_germline.cwl Branch/Commit ID: 3f3b186da9bf82a5e2ae74ba27aef35a46174ebe |
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Detect Docm variants
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/docm_cle.cwl Branch/Commit ID: 3f3b186da9bf82a5e2ae74ba27aef35a46174ebe |
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QIIME2 Step 2 (DADA2 option)
QIIME2 DADA2, feature summaries, phylogenetic diversity tree, taxonomic analysis and ancom |
https://github.com/bespin-workflows/16s-qiime2.git
Path: 16s-step2-dada2-paired.cwl Branch/Commit ID: b4c07a7e07ba9ce862a2be057a905d300f3c8882 |
