Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Per-region pindel	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pindel_cat.cwl Branch/Commit ID: a93be3183c2218ee50f13ae2675dd1cde563fdbc
	varscan somatic workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/varscan.cwl Branch/Commit ID: ae75b938e6e8ae777a55686bbacad824b3c6788c
	02-trim-pe.cwl ChIP-seq 02 trimming - reads: PE	https://github.com/alexbarrera/GGR-cwl.git Path: v1.0/ChIP-seq_pipeline/02-trim-pe.cwl Branch/Commit ID: dd2241dbbbc23abd91b5e6a18c139530e7ef8d2b
	blastp_wnode_naming	https://github.com/ncbi/pgap.git Path: task_types/tt_blastp_wnode_naming.cwl Branch/Commit ID: b12ec8c8e832151033b9e6c0a76a3c3df18d45da
	WGS QC workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/qc_wgs.cwl Branch/Commit ID: 9a657bc8c462542dc7f57fba9e04dc1669f966ba
	Run genomic CMsearch (5S rRNA)	https://github.com/ncbi/pgap.git Path: bacterial_noncoding/wf_gcmsearch.cwl Branch/Commit ID: 66b5bc323dcd23e1b2c14bf4783babf0f15ca43b
	Add snv and indel bam-readcount files to a vcf	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/vcf_readcount_annotator.cwl Branch/Commit ID: f9600f9959acdc30259ba7e64de61104c9b01f0b
	Bisulfite QC tools	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bisulfite_qc.cwl Branch/Commit ID: 7f9dfad8e45ca096ae738cff646195b2b1ba7d7f
	umi molecular alignment fastq workflow	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/umi_molecular_alignment.cwl Branch/Commit ID: 869b331cfeb9dbd5907498e3eccdebc7c28283e5
	extract_capture_kit.cwl	https://github.com/NCI-GDC/gdc-dnaseq-cwl.git Path: workflows/bamfastq_align/extract_capture_kit.cwl Branch/Commit ID: 8edf6a5e4e7790434ad0742e50d0c97a5d0bb846