Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
|---|---|---|---|
|
|
strelka workflow
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/strelka_and_post_processing.cwl Branch/Commit ID: bcc6adaf15035f5ce6fc851e27b1173b0fd20c1c |
|
|
|
fp_filter workflow
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/fp_filter.cwl Branch/Commit ID: a3e26136043c03192c38c335316d2d36e3e67478 |
|
|
|
bam to trimmed fastqs and biscuit alignments
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_to_trimmed_fastq_and_biscuit_alignments.cwl Branch/Commit ID: a93be3183c2218ee50f13ae2675dd1cde563fdbc |
|
|
|
Unaligned BAM to BQSR and VCF
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_to_bqsr.cwl Branch/Commit ID: 88f1e02b261bf9ce882eba306b6245c64328632b |
|
|
|
Exome QC workflow
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/qc_exome.cwl Branch/Commit ID: 88f1e02b261bf9ce882eba306b6245c64328632b |
|
|
|
exome alignment and germline variant detection
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/germline_detect_variants.cwl Branch/Commit ID: 869b331cfeb9dbd5907498e3eccdebc7c28283e5 |
|
|
|
exome alignment with qc
|
https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/exome_alignment.cwl Branch/Commit ID: 869b331cfeb9dbd5907498e3eccdebc7c28283e5 |
|
|
|
Detect DoCM variants
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/docm_germline.cwl Branch/Commit ID: 7f9dfad8e45ca096ae738cff646195b2b1ba7d7f |
|
|
|
Varscan Workflow
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/varscan_germline.cwl Branch/Commit ID: 7f9dfad8e45ca096ae738cff646195b2b1ba7d7f |
|
|
|
Exome QC workflow
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/qc_exome.cwl Branch/Commit ID: 18600518ce6539a2e29c1707392a4c5da5687fa3 |
