Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Subworkflow to allow calling cnvkit with cram instead of bam files

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/cram_to_cnvkit.cwl

Branch/Commit ID: fa0bf2a51b72cd0869253943b67aa8e271633945
workflow graph nestedworkflows.cwl

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/examples/nestedworkflows.cwl

Branch/Commit ID: 691dea280b40ac177b4a38b33375139ca0ce7e81
workflow graph exome alignment and somatic variant detection

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/somatic_exome.cwl

Branch/Commit ID: fa0bf2a51b72cd0869253943b67aa8e271633945
workflow graph workflow-blast-ebeye-pdbe.cwl

https://github.com/ebi-wp/webservice-cwl.git

Path: workflows/workflow-blast-ebeye-pdbe.cwl

Branch/Commit ID: 215ed5c67a58df03be61e976a93588075bd255a5
workflow graph mergeBAMs.cwl

https://github.com/Kevin-Fang/recall-veritas-pgp.git

Path: merge/mergeBAMs.cwl

Branch/Commit ID: 088ef02210e3b71874a54ee54cba38514735e73d
workflow graph workflow-phmmer-blast.cwl

https://github.com/ebi-wp/webservice-cwl.git

Path: workflows/workflow-phmmer-blast.cwl

Branch/Commit ID: 215ed5c67a58df03be61e976a93588075bd255a5
workflow graph kf-cram2gvcf_calc_contam.cwl

https://github.com/cr-ste-justine/chujs-alignment-workflow.git

Path: workflows/kf-cram2gvcf_calc_contam.cwl

Branch/Commit ID: f2a1a903cfdd8d339e022ef65a55e2d71e8d93b1
workflow graph conditional_markduplicates.cwl

https://github.com/nci-gdc/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/conditional_markduplicates.cwl

Branch/Commit ID: 017c7572ea309c7d5b34bcc9bc1bdafbe47cb515
workflow graph scatterfail.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/scatterfail.cwl

Branch/Commit ID: 691dea280b40ac177b4a38b33375139ca0ce7e81
workflow graph chksum_seqval_wf_paired_fq.cwl

https://github.com/cancerit/workflow-seq-import.git

Path: cwls/chksum_seqval_wf_paired_fq.cwl

Branch/Commit ID: d1feaa38758135d0d1af7bb413942281ed702257