Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
|---|---|---|---|
|
|
prefetch_fastq.cwl
Worfklow combining an SRA fetch from NCBI with a fastq-dump cmd |
https://github.com/fjrmoreews/cwl-workflow-SARS-CoV-2.git
Path: bio-cwl-tools/sratoolkit/prefetch_fastq.cwl Branch/Commit ID: master |
|
|
|
QIIME2 Step 3
QIIME2 Alpha/beta diversity analysis and Alpha rarefaction plotting |
https://github.com/Duke-GCB/bespin-cwl.git
Path: packed/qiime2-step3-alpha-analysis.cwl Branch/Commit ID: qiime2-workflow-paired Packed ID: main |
|
|
|
LSU-from-tablehits.cwl
|
https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/LSU-from-tablehits.cwl Branch/Commit ID: 71d9c83 |
|
|
|
wf_get_reproducible_eclip_peaks.cwl
The main workflow that produces two reproducible peaks via IDR given two eCLIP samples (1 input, 1 IP each). |
https://github.com/YeoLab/merge_peaks.git
Path: cwl/wf_get_reproducible_eclip_peaks.cwl Branch/Commit ID: master |
|
|
|
dynresreq-workflow-inputdefault.cwl
|
https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/dynresreq-workflow-inputdefault.cwl Branch/Commit ID: master |
|
|
|
hi-c-processing-pairs.cwl
|
https://github.com/4dn-dcic/pipelines-cwl.git
Path: cwl_awsem_v1/hi-c-processing-pairs.cwl Branch/Commit ID: dev2 |
|
|
|
process VCF workflow
|
https://github.com/ChrisMaherLab/PACT.git
Path: subworkflows/strelka_process_vcf.cwl Branch/Commit ID: master |
|
|
|
SSU-from-tablehits.cwl
|
https://github.com/farahzkhan/ebi-metagenomics-cwl.git
Path: tools/SSU-from-tablehits.cwl Branch/Commit ID: master |
|
|
|
cmsearch-multimodel.cwl
|
https://github.com/proteinswebteam/ebi-metagenomics-cwl.git
Path: workflows/cmsearch-multimodel.cwl Branch/Commit ID: a8abd0e |
|
|
|
RNASelector as a CWL workflow
https://doi.org/10.1007/s12275-011-1213-z |
https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/rna-selector.cwl Branch/Commit ID: 930a2cf |
