Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Detect DoCM variants

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/docm_germline.cwl

Branch/Commit ID: 88f1e02b261bf9ce882eba306b6245c64328632b
workflow graph fastqtosam_pe.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/fastqtosam/fastqtosam_pe.cwl

Branch/Commit ID: 51d4f5c34d2cc0ed535e2382c4e458aeefd308de
workflow graph PGAP Pipeline

PGAP pipeline for external usage, powered via containers

 https://github.com/ncbi/pgap.git

Path: wf_common.cwl

Branch/Commit ID: b4a6e46405c08e0b14ad92f0ab38bcc4a69caa5c
workflow graph cram_to_bam workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/cram_to_bam_and_index.cwl

Branch/Commit ID: 72e0bdc1ec449d86df4534132e9a30ad7e9b8afd
workflow graph 1st-workflow.cwl

https://github.com/common-workflow-language/user_guide.git

Path: _includes/cwl/22-nested-workflows/1st-workflow.cwl

Branch/Commit ID: 06a44bea01af4dedded36bd422260574c7b28c9b
workflow graph gethoge-and-pigz.cwl

https://github.com/dbcls/AOE.git

Path: gethoge-and-pigz.cwl

Branch/Commit ID: 573715ad33183cab17d79fa7e5e5aa8ae93bc138
workflow graph bwa_se.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/bwa_se.cwl

Branch/Commit ID: 017c7572ea309c7d5b34bcc9bc1bdafbe47cb515
workflow graph Unaligned to aligned BAM

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/align.cwl

Branch/Commit ID: 4b5970dcf08bac2598e62ffd2673e67a25004c40
workflow graph HS Metrics workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/hs_metrics.cwl

Branch/Commit ID: 4b5970dcf08bac2598e62ffd2673e67a25004c40
workflow graph Run tRNAScan

https://github.com/ncbi/pgap.git

Path: bacterial_trna/wf_trnascan.cwl

Branch/Commit ID: 2c7879b47890b9300ab9b5ebd35e17372e077757