Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Bacterial Annotation, pass 2, blastp-based functional annotation (first pass)
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https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass2.cwl Branch/Commit ID: 4b8d11048f1047140b337a2cac6503d80a22d683 |
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fastqPE2bam.cwl
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https://github.com/ddbj/human-reseq.git
Path: Workflows/fastqPE2bam.cwl Branch/Commit ID: b06a9beafaa6009587d1f0fca0941bca5e0f0a27 |
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xenbase-fastq-bowtie-bigwig-se-pe.cwl
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https://github.com/datirium/workflows.git
Path: subworkflows/xenbase-fastq-bowtie-bigwig-se-pe.cwl Branch/Commit ID: 3ceeb2e90f49579369b2e10485908516348381a9 |
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schemadef-wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/schemadef-wf.cwl Branch/Commit ID: fd6e054510e2bb65eed4069a3a88013d7ecbb99c |
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Bacterial Annotation, pass 2, blastp-based functional annotation (first pass)
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https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass2.cwl Branch/Commit ID: 1bf7dc7b03ea3c64e54375cc5c3767849a801000 |
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Resolve duplicate/overlapping calls in the gVCFs in a named list
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https://github.com/curoverse/l7g.git
Path: cwl-version/clean/cwl/tiling_clean_gvcf_named.cwl Branch/Commit ID: e0d513006822c0acdbf014638d11fc9a237c59f1 |
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hg38-tileassembly.cwl
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https://github.com/curoverse/l7g.git
Path: cwl-version/experimental/l7g-tile-assembly/tile-assembly-hg38/cwl/hg38-tileassembly.cwl Branch/Commit ID: 720b557e4a822da8c6139a1143e2c8ceaf2102ff |
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gathered exome alignment and somatic variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/gathered_somatic_exome.cwl Branch/Commit ID: ad65dc1dfff9afa5077f498b85e699716c47f6cb |
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schemadef-wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/schemadef-wf.cwl Branch/Commit ID: 5c7799a145595323d0a8628be1fe0e24985e793a |
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Workflow to create a FASTA file for the tagset
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https://github.com/curoverse/l7g.git
Path: cwl-version/tagset/l7g-tagset.cwl Branch/Commit ID: 2d067e70af7c1a49a2a015ddcd0d859b0b885e98 |
