Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	schemadef-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/schemadef-wf.cwl Branch/Commit ID: ecdfe1ee769d05790f70ac87a711131f441f3753
	conditional_markduplicates.cwl	https://github.com/nci-gdc/gdc-dnaseq-cwl.git Path: workflows/bamfastq_align/conditional_markduplicates.cwl Branch/Commit ID: 18affdd927cc388fab2c113dc2ec6df782af2a52
	count-lines6-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/count-lines6-wf.cwl Branch/Commit ID: fc6ca8b1498926f705dcfde7ab0a365bd09a9675
	workflow.cwl	https://github.com/NAL-i5K/Organism_Onboarding.git Path: flow_dispatch/workflow.cwl Branch/Commit ID: c4c5822441a6a7342e9fdede8e06c56ff865c74c
	Bacterial Annotation, pass 3, structural annotation, functional annotation: ab initio GeneMark, by WP, by HMM (second pass)	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_bacterial_annot_pass3.cwl Branch/Commit ID: ef266744578e2dcbce57c110c6fa3b9eee91e316
	adapter for sequence_align_and_tag Some workflow engines won't stage files in our nested structure, so parse it out here	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/sequence_align_and_tag_adapter.cwl Branch/Commit ID: a23f42ef49c10a588fd35a3afaad5de03e253533
	count-lines3-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/count-lines3-wf.cwl Branch/Commit ID: 03af16c9df2ee77485d4ab092cd64ae096d2e71c
	Generate genome index bowtie Workflow makes indices for [bowtie](http://bowtie-bio.sourceforge.net/tutorial.shtml) v1.2.0 (12/30/2016). Executes `bowtie-index` to generate indices requires genome [FASTA](http://zhanglab.ccmb.med.umich.edu/FASTA/) file as input, returns results as a directory	https://github.com/datirium/workflows.git Path: workflows/bowtie-index.cwl Branch/Commit ID: dda9e6e06a656b7b3fa7504156474b962fe3953c
	gp_makeblastdb	https://github.com/ncbi/pgap.git Path: progs/gp_makeblastdb.cwl Branch/Commit ID: 61e3752f1f5e2ee498fa024c235226f8580be942
	spurious_annot	https://github.com/ncbi/pgap.git Path: spurious_annot/wf_spurious_annot_pass1.cwl Branch/Commit ID: 61e3752f1f5e2ee498fa024c235226f8580be942