Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Unaligned to aligned BAM	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/align.cwl Branch/Commit ID: 869b331cfeb9dbd5907498e3eccdebc7c28283e5
	Unaligned bam to sorted, markduped bam	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/align_sort_markdup.cwl Branch/Commit ID: 869b331cfeb9dbd5907498e3eccdebc7c28283e5
	Add snv and indel bam-readcount files to a vcf	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/vcf_readcount_annotator.cwl Branch/Commit ID: a23f42ef49c10a588fd35a3afaad5de03e253533
	cwlsite.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/site/cwlsite.cwl Branch/Commit ID: 03af16c9df2ee77485d4ab092cd64ae096d2e71c
	Add snv and indel bam-readcount files to a vcf	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/vcf_readcount_annotator.cwl Branch/Commit ID: ddd748516b25256a461ea9277303406fa2759b00
	merge_duprem_filter.cwl	https://github.com/CompEpigen/ATACseq_workflows.git Path: CWL/workflow_modules/merge_duprem_filter.cwl Branch/Commit ID: 52515b5c053d3cf157be070efac954043892429f
	sum-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/sum-wf.cwl Branch/Commit ID: 9e7c68c0834645ba53a7e2b5f70d53df9d051c92
	extract_capture_kit_http.cwl	https://github.com/NCI-GDC/gdc-dnaseq-cwl.git Path: workflows/bamfastq_align/extract_capture_kit_http.cwl Branch/Commit ID: 17823fcd036d134df803fbf76e23b0bc5eabedfd
	Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pvacseq.cwl Branch/Commit ID: ec5355f335852e51c6938809c16ea1d230a3f983
	Execute CRISPR	https://github.com/ncbi/pgap.git Path: bacterial_mobile_elem/wf_bacterial_mobile_elem.cwl Branch/Commit ID: 8cc9b995bca666c54c673a5eb8d9b8c6f8e84490