Explore Workflows

https://github.com/simleo/workflow-run-crate.git

Path: tools/cwlprov_to_crate/tld/tld.cwl

Branch/Commit ID: tld_workflow_bad_connection

https://github.com/andurill/ACCESS-Pipeline.git

Path: workflows/subworkflows/vcf_concat.cwl

Branch/Commit ID: master

https://github.com/alpha-unito/Sogei-DevOps-pipeline.git

Path: unito-pipeline/cwl/main-unito.cwl

Branch/Commit ID: main

Workflow to find hotspot VAFs from duplex (for Tumor sample) and unfiltered (for Normal sample) pileups. These inputs are all required to be sorted in the same order: sample_ids patient_ids sample_classes unfiltered_pileups duplex_pileups

https://github.com/mskcc/Innovation-Pipeline.git

Path: workflows/subworkflows/find_hotspots_in_normals.cwl

Branch/Commit ID: master

https://github.com/proteinswebteam/ebi-metagenomics-cwl.git

Path: workflows/cmsearch-multimodel.cwl

Branch/Commit ID: a8abd0e

https://github.com/DataBiosphere/topmed-workflows.git

Path: vcf-comparator/ConcordanceTestWorkflow.cwl

Branch/Commit ID: 1.16.0

CNV GRIDSS calling

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/cwl/subworkflows/cnv_gridss.cwl

Branch/Commit ID: 1.0.6

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/iwdr_with_nested_dirs.cwl

Branch/Commit ID: master

https://github.com/proteinswebteam/ebi-metagenomics-cwl.git

Path: tools/collate_unique_SSU_headers.cwl

Branch/Commit ID: caea457

https://github.com/Sentieon/Sentieon-cwl.git

Path: stage/hc-distr.cwl

Branch/Commit ID: master